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mastodon-sc / mastodon-deep-lineage

A collection of plugins to analyse lineages of tracked objects in Mastodon
BSD 2-Clause "Simplified" License
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Select resolution level in export ellipsoid to label image #106

Closed stefanhahmann closed 4 months ago

stefanhahmann commented 4 months ago

So far, it is possible to reduce the temporal resolution, when export the ellipsoids of Mastodon as label image.

This PR introduces the possibility to reduce the spatial resolution, since this may be handy to reduce the export time and the size of the resulting image.

For this purpose, this PR introduces the possibility that the user can decide for a mip map level that exists in the first source of the image and export the ellipsoids to the label image at the resolution of this mip map level.

Moreover, the export using SCIFIO turned out to be slow for larger datasets. Using the ImageJ export helps to speed up this process.

sonarcloud[bot] commented 4 months ago

Quality Gate Failed Quality Gate failed

Failed conditions
56.0% Coverage on New Code (required ≥ 80%)

See analysis details on SonarCloud