Exception during Fiji startup

[danielmccusker]

When I open the Mastodon launcher in Fiji, the console throws the warning

[WARNING] 1 exceptions occurred during plugin discovery.

And when I try to start a new Mastodon project from an XML file, I get the following exception

Exception in thread "AWT-EventQueue-0" java.lang.NoSuchMethodError: bdv.spimdata.XmlIoSpimDataMinimal.load(Ljava/lang/String;)Lbdv/spimdata/SpimDataMinimal; at org.mastodon.mamut.launcher.LauncherGUI$OpenBDVPanel.checkBDVFile(LauncherGUI.java:376) at org.mastodon.mamut.launcher.LauncherGUI$OpenBDVPanel.lambda$null$0(LauncherGUI.java:366) at org.mastodon.mamut.launcher.LauncherUtil.browseToBDVFile(LauncherUtil.java:137) at org.mastodon.mamut.launcher.LauncherGUI$OpenBDVPanel.lambda$new$1(LauncherGUI.java:363) at javax.swing.AbstractButton.fireActionPerformed(AbstractButton.java:2022) at javax.swing.AbstractButton$Handler.actionPerformed(AbstractButton.java:2348) at javax.swing.DefaultButtonModel.fireActionPerformed(DefaultButtonModel.java:402) at javax.swing.DefaultButtonModel.setPressed(DefaultButtonModel.java:259) at javax.swing.plaf.basic.BasicButtonListener.mouseReleased(BasicButtonListener.java:252) at java.awt.Component.processMouseEvent(Component.java:6539) at javax.swing.JComponent.processMouseEvent(JComponent.java:3324) at java.awt.Component.processEvent(Component.java:6304) at java.awt.Container.processEvent(Container.java:2239) at java.awt.Component.dispatchEventImpl(Component.java:4889) at java.awt.Container.dispatchEventImpl(Container.java:2297) at java.awt.Component.dispatchEvent(Component.java:4711) at java.awt.LightweightDispatcher.retargetMouseEvent(Container.java:4904) at java.awt.LightweightDispatcher.processMouseEvent(Container.java:4535) at java.awt.LightweightDispatcher.dispatchEvent(Container.java:4476) at java.awt.Container.dispatchEventImpl(Container.java:2283) at java.awt.Window.dispatchEventImpl(Window.java:2746) at java.awt.Component.dispatchEvent(Component.java:4711) at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:760) at java.awt.EventQueue.access$500(EventQueue.java:97) at java.awt.EventQueue$3.run(EventQueue.java:709) at java.awt.EventQueue$3.run(EventQueue.java:703) at java.security.AccessController.doPrivileged(Native Method) at java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:74) at java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:84) at java.awt.EventQueue$4.run(EventQueue.java:733) at java.awt.EventQueue$4.run(EventQueue.java:731) at java.security.AccessController.doPrivileged(Native Method) at java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:74) at java.awt.EventQueue.dispatchEvent(EventQueue.java:730) at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:205) at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:116) at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:105) at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:101) at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:93) at java.awt.EventDispatchThread.run(EventDispatchThread.java:82)

After which nothing happens when I click "create". Is this a known issue?

[tinevez]

Yes! caused by an update of BDV libraries. working on it.

[mschin1]

Thank you for working on it!

Just here to say that I got a similar issue when trying to open a mastodon file from yesterday. Also the spimdata but more exceptions and colormodes.yaml

[WARNING] 5 exceptions occurred during plugin discovery. Feature color mode file /home/schindle/.mastodon/colormodes.yaml not found. Using builtin styles. Exception in thread "AWT-EventQueue-0" java.lang.NoSuchMethodError: bdv.spimdata.XmlIoSpimDataMinimal.load(Ljava/lang/String;)Lbdv/spimdata/SpimDataMinimal; at org.mastodon.mamut.ProjectManager.open(ProjectManager.java:364) at org.mastodon.mamut.launcher.MastodonLauncher.lambda$null$16(MastodonLauncher.java:411) at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:311) at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:758) at java.awt.EventQueue.access$500(EventQueue.java:97) at java.awt.EventQueue$3.run(EventQueue.java:709) at java.awt.EventQueue$3.run(EventQueue.java:703) at java.security.AccessController.doPrivileged(Native Method) at java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:74) at java.awt.EventQueue.dispatchEvent(EventQueue.java:728) at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:205) at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:116) at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:105) at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:101) at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:93) at java.awt.EventDispatchThread.run(EventDispatchThread.java:82)

[tinevez]

Hello @danielmccusker and @mschin1 I uploaded a new version that should fix this. Can you confirm it does? More discussions on this forum topic: https://forum.image.sc/t/mastodon-and-mamut-are-currently-broken-after-fiji-update-working-on-fixes-right-now/71856/5

[mschin1]

Hello! Sorry for the delay! My files now managed to open again and it seems to work fine!

Thank you!!!