Unrecognized function or variable ‘fastTableReadV3‘

matanhofree / crc-immune-hubs

Principal analysis code used in for analysis of single cell RNAseq of primary untreated colon cancer. As described in: "Spatially organized multicellular immune hubs in human colorectal cancer"

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Unrecognized function or variable ‘fastTableReadV3‘ #4

Open cubense opened 2 years ago

cubense commented 2 years ago

Dear Authors, Thanks for sharing your data and code. This error occurred when I configured the environment and downloaded the data to reproduce the figure. I noticed that this function is compiled by C, and I installed mingw, but I still can't solve the problem. I would like to ask what could be the problem? Thanks in advance.

cubense commented 2 years ago

I finally found out that this is because my system is Windows. In addition,in your code for figure5_6_7 is missing the getting process of "zOutMat_sig" is missing.