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materialsproject / jobflow

jobflow is a library for writing computational workflows.
https://materialsproject.github.io/jobflow
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Bump networkx from 3.2.1 to 3.3 #580

Open dependabot[bot] opened 3 months ago

dependabot[bot] commented 3 months ago

Bumps networkx from 3.2.1 to 3.3.

Release notes

Sourced from networkx's releases.

NetworkX 3.3

networkx 3.3

We're happy to announce the release of networkx 3.3!

API Changes

  • Disallow negative number of nodes in complete_multipartite_graph (#7057).
  • DEP: Deprecate the all_triplets one-liner (#7060).
  • [A-star] Added expansion pruning via cutoff if cutoff is provided (#7073).
  • Make HITS raise exceptions consistent with power iterations (#7084).
  • DEP: Deprecate random_triad (#7061).
  • Added feature modular graph product (#7227).
  • ENH: Speed up common/non_neighbors by using _adj dict operations (#7244).
  • Deprecate the create argument of nonisomorphic_trees (#7316).
  • Improve total_spanning_tree_weight (#7100).
  • Update init.py (#7320).
  • add **kwargs to traveling_salesman_problem (#7371).

Enhancements

  • Add Tadpole graph (#6999).
  • [A-star] Added expansion pruning via cutoff if cutoff is provided (#7073).
  • Implementation of $S^1$ model (#6858).
  • [Feat] Random expanders utilities (#6761).
  • Compare graphs for generator functions when running tests with backend (#7066).
  • Add Kirchhoff index / Effective graph resistance (#6926).
  • Changed return types of shortest path methods to improve consistency (#6584).
  • New PR for Fixes minimal d-separator function failing to handle cases where no d-separators exist (#7019).
  • ENH : Provide non-normalized and normalized directed laplacian matrix calculation (#7199).
  • feat: drop the use of node attribute "first_nbr" in PlanarEmbedding (#7202).
  • Add functions to compute Schultz and Gutman Index (#3709).
  • Divisive community algorithms (#5830).
  • Added feature modular graph product (#7227).
  • ENH : added sort_neighbors to all functions in depth_first_search.py (#7196).
  • New graph generator for the Kneser graph (#7146).
  • Draw MultiDiGraph edges and labels qa7008 (#7010).
  • Use github actions to run a comparison benchmark (#7268).
  • BFS layout implementation (#5179).
  • Add max_level= argument to louvain_communities to limit macro-iterations (#6909).
  • Review and update @nx._dispatchable usage since 3.2.1 (#7302).
  • Transmogrify _dispatchable objects into functions (#7298).
  • fix: make PlanarEmbedding.copy() use add_edges_from() from parent (closes #7223) (#7224).
  • Allow seed of np.random instance to exactly produce arbitrarily large integers (#6869).
  • Improve total_spanning_tree_weight (#7100).
  • add seed to nx.generate_random_paths (#7332).
  • Allow backends to implement should_run (#7257).
  • Adding tree broadcasting algorithm in a new module (#6928).
  • Option to include initial labels in weisfeiler_lehman_subgraph_hashes (#6601).
  • Add better error message when trying to get edge that is not present (#7245).

... (truncated)

Commits
  • 7fdddfa Designate 3.3 release
  • 7fe09dd Bump the GH actions with 3 updates (#7310)
  • 83d2cf4 Move the backend docs and connect the config docs. Both in a single sidebar e...
  • 754173b Fix exception for del config[key] (#7391)
  • 26d218b Rm deprecated np.row_stack in favor of vstack. (#7390)
  • 0d878d8 Update test suite to handle when scipy is not installed (#7388)
  • fbb2d82 Add dispatching to broadcasting.py (#7386)
  • 76c3e9b Fix pygraphviz tests causing segmentation faults in backend test (#7380)
  • c8c838f add **kwargs to traveling_salesman_problem (#7371)
  • 6e84e1e ENH: Cache graphs objects when converting to a backend (#7345)
  • Additional commits viewable in compare view


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