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matrix-profile-foundation / tsmp

R Functions implementing UCR Matrix Profile Algorithm
https://matrix-profile-foundation.github.io/tsmp
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Build fails: a conflict with system headers due to `math.h`? #103

Open barracuda156 opened 6 months ago

barracuda156 commented 6 months ago

Something does not work with cmath correctly:

--->  Extracting tsmp-0.4.15.tar.gz
Executing:  cd "/opt/local/var/macports/build/_opt_PPCSnowLeopardPorts_R_R-tsmp/R-tsmp/work" && /usr/bin/gzip -dc '/opt/local/var/macports/distfiles/R-tsmp/tsmp-0.4.15.tar.gz' | /usr/bin/gnutar --no-same-owner -xf - 
--->  Configuring R-tsmp
Executing:  cd "/opt/local/var/macports/build/_opt_PPCSnowLeopardPorts_R_R-tsmp/R-tsmp/work/tsmp-0.4.15" && /opt/local/bin/R CMD build . --no-manual --no-build-vignettes --keep-empty-dirs 
* checking for file ‘./DESCRIPTION’ ... OK
* preparing ‘tsmp’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
* building ‘tsmp_0.4.15.tar.gz’

--->  Building R-tsmp
xinstall: mkdir /opt/local/var/macports/build/_opt_PPCSnowLeopardPorts_R_R-tsmp/R-tsmp/work/build
Executing:  cd "/opt/local/var/macports/build/_opt_PPCSnowLeopardPorts_R_R-tsmp/R-tsmp/work/tsmp-0.4.15" && /opt/local/bin/R CMD INSTALL . --library=/opt/local/var/macports/build/_opt_PPCSnowLeopardPorts_R_R-tsmp/R-tsmp/work/build --install-tests 
* installing *source* package ‘tsmp’ ...
** using staged installation
** libs
using C++ compiler: ‘g++-mp-13 (MacPorts gcc13 13.2.0_4+stdlib_flag) 13.2.0’
using C++11
Warning in system2("xcrun", "--show-sdk-path", TRUE, TRUE) :
  running command ''xcrun' --show-sdk-path 2>&1' had status 64
using SDK: ‘NA’‘NA’‘NA’‘NA’‘NA’‘NA’
/opt/local/bin/g++-mp-13 -std=gnu++11 -I"/opt/local/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/Rcpp/include' -I'/opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/RcppParallel/include' -isystem/opt/local/include/LegacySupport -I/opt/local/include    -fPIC  -pipe -Os -arch ppc   -c RcppExports.cpp -o RcppExports.o
/opt/local/bin/g++-mp-13 -std=gnu++11 -I"/opt/local/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/Rcpp/include' -I'/opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/RcppParallel/include' -isystem/opt/local/include/LegacySupport -I/opt/local/include    -fPIC  -pipe -Os -arch ppc   -c math.cpp -o math.o
In file included from /opt/local/include/LegacySupport/cmath:54,
                 from /opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/Rcpp/include/Rcpp/platform/compiler.h:100,
                 from /opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/Rcpp/include/Rcpp/r/headers.h:62,
                 from /opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/Rcpp/include/RcppCommon.h:30,
                 from /opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/Rcpp/include/Rcpp.h:27,
                 from math.h:4,
                 from math.cpp:1:
/opt/local/include/gcc13/c++/cmath:85:11: error: 'acos' has not been declared in '::'
   85 |   using ::acos;
      |           ^~~~
/opt/local/include/gcc13/c++/cmath:104:11: error: 'asin' has not been declared in '::'
  104 |   using ::asin;
      |           ^~~~
/opt/local/include/gcc13/c++/cmath:123:11: error: 'atan' has not been declared in '::'
  123 |   using ::atan;
      |           ^~~~
/opt/local/include/gcc13/c++/cmath:142:11: error: 'atan2' has not been declared in '::'
  142 |   using ::atan2;
      |           ^~~~~
/opt/local/include/gcc13/c++/cmath:154:11: error: 'ceil' has not been declared in '::'
  154 |   using ::ceil;
      |           ^~~~
/opt/local/include/gcc13/c++/cmath:173:11: error: 'cos' has not been declared in '::'
  173 |   using ::cos;
      |           ^~~
/opt/local/include/gcc13/c++/cmath:192:11: error: 'cosh' has not been declared in '::'
  192 |   using ::cosh;
      |           ^~~~
/opt/local/include/gcc13/c++/cmath:211:11: error: 'exp' has not been declared in '::'
  211 |   using ::exp;
      |           ^~~
/opt/local/include/gcc13/c++/cmath:230:11: error: 'fabs' has not been declared in '::'
  230 |   using ::fabs;
      |           ^~~~
/opt/local/include/gcc13/c++/cmath:249:11: error: 'floor' has not been declared in '::'
  249 |   using ::floor;
      |           ^~~~~
/opt/local/include/gcc13/c++/cmath:268:11: error: 'fmod' has not been declared in '::'
  268 |   using ::fmod;
      |           ^~~~
/opt/local/include/gcc13/c++/cmath:280:11: error: 'frexp' has not been declared in '::'
  280 |   using ::frexp;
      |           ^~~~~
/opt/local/include/gcc13/c++/cmath:299:11: error: 'ldexp' has not been declared in '::'
  299 |   using ::ldexp;
      |           ^~~~~
/opt/local/include/gcc13/c++/cmath:318:11: error: 'log' has not been declared in '::'
  318 |   using ::log;
      |           ^~~
/opt/local/include/gcc13/c++/cmath:337:11: error: 'log10' has not been declared in '::'
  337 |   using ::log10;
      |           ^~~~~
/opt/local/include/gcc13/c++/cmath:356:11: error: 'modf' has not been declared in '::'
  356 |   using ::modf;
      |           ^~~~
/opt/local/include/gcc13/c++/cmath:368:11: error: 'pow' has not been declared in '::'
  368 |   using ::pow;
      |           ^~~
/opt/local/include/gcc13/c++/cmath:396:11: error: 'sin' has not been declared in '::'
  396 |   using ::sin;
      |           ^~~
/opt/local/include/gcc13/c++/cmath:415:11: error: 'sinh' has not been declared in '::'
  415 |   using ::sinh;
      |           ^~~~
/opt/local/include/gcc13/c++/cmath:434:11: error: 'sqrt' has not been declared in '::'
  434 |   using ::sqrt;
      |           ^~~~
/opt/local/include/gcc13/c++/cmath:453:11: error: 'tan' has not been declared in '::'
  453 |   using ::tan;
      |           ^~~
/opt/local/include/gcc13/c++/cmath:472:11: error: 'tanh' has not been declared in '::'
  472 |   using ::tanh;
      |           ^~~~
/opt/local/include/gcc13/c++/cmath: In function 'constexpr int std::fpclassify(float)':
/opt/local/include/gcc13/c++/cmath:1098:33: error: 'FP_NAN' was not declared in this scope; did you mean 'ML_NAN'?
 1098 |   { return __builtin_fpclassify(FP_NAN, FP_INFINITE, FP_NORMAL,
      |                                 ^~~~~~
      |                                 ML_NAN
/opt/local/include/gcc13/c++/cmath:1098:41: error: 'FP_INFINITE' was not declared in this scope; did you mean 'R_FINITE'?
 1098 |   { return __builtin_fpclassify(FP_NAN, FP_INFINITE, FP_NORMAL,
      |                                         ^~~~~~~~~~~
      |                                         R_FINITE
/opt/local/include/gcc13/c++/cmath:1098:54: error: 'FP_NORMAL' was not declared in this scope; did you mean 'IOPOL_NORMAL'?
 1098 |   { return __builtin_fpclassify(FP_NAN, FP_INFINITE, FP_NORMAL,
      |                                                      ^~~~~~~~~
      |                                                      IOPOL_NORMAL
/opt/local/include/gcc13/c++/cmath:1099:33: error: 'FP_SUBNORMAL' was not declared in this scope
 1099 |                                 FP_SUBNORMAL, FP_ZERO, __x); }
      |                                 ^~~~~~~~~~~~
/opt/local/include/gcc13/c++/cmath:1099:47: error: 'FP_ZERO' was not declared in this scope; did you mean 'NZERO'?
 1099 |                                 FP_SUBNORMAL, FP_ZERO, __x); }
      |                                               ^~~~~~~
      |                                               NZERO
/opt/local/include/gcc13/c++/cmath:1099:62: error: body of 'constexpr' function 'constexpr int std::fpclassify(float)' not a return-statement
 1099 |                                 FP_SUBNORMAL, FP_ZERO, __x); }
      |                                                              ^
/opt/local/include/gcc13/c++/cmath: In function 'constexpr int std::fpclassify(double)':
/opt/local/include/gcc13/c++/cmath:1103:33: error: 'FP_NAN' was not declared in this scope; did you mean 'ML_NAN'?
 1103 |   { return __builtin_fpclassify(FP_NAN, FP_INFINITE, FP_NORMAL,
      |                                 ^~~~~~
      |                                 ML_NAN
/opt/local/include/gcc13/c++/cmath:1103:41: error: 'FP_INFINITE' was not declared in this scope; did you mean 'R_FINITE'?
 1103 |   { return __builtin_fpclassify(FP_NAN, FP_INFINITE, FP_NORMAL,
      |                                         ^~~~~~~~~~~
      |                                         R_FINITE
/opt/local/include/gcc13/c++/cmath:1103:54: error: 'FP_NORMAL' was not declared in this scope; did you mean 'IOPOL_NORMAL'?
 1103 |   { return __builtin_fpclassify(FP_NAN, FP_INFINITE, FP_NORMAL,
      |                                                      ^~~~~~~~~
      |                                                      IOPOL_NORMAL
/opt/local/include/gcc13/c++/cmath:1104:33: error: 'FP_SUBNORMAL' was not declared in this scope
 1104 |                                 FP_SUBNORMAL, FP_ZERO, __x); }
      |                                 ^~~~~~~~~~~~
/opt/local/include/gcc13/c++/cmath:1104:47: error: 'FP_ZERO' was not declared in this scope; did you mean 'NZERO'?
 1104 |                                 FP_SUBNORMAL, FP_ZERO, __x); }
      |                                               ^~~~~~~
      |                                               NZERO
/opt/local/include/gcc13/c++/cmath:1104:62: error: body of 'constexpr' function 'constexpr int std::fpclassify(double)' not a return-statement
 1104 |                                 FP_SUBNORMAL, FP_ZERO, __x); }
      |                                                              ^
/opt/local/include/gcc13/c++/cmath: In function 'constexpr int std::fpclassify(long double)':
/opt/local/include/gcc13/c++/cmath:1108:33: error: 'FP_NAN' was not declared in this scope; did you mean 'ML_NAN'?
 1108 |   { return __builtin_fpclassify(FP_NAN, FP_INFINITE, FP_NORMAL,
      |                                 ^~~~~~
      |                                 ML_NAN
/opt/local/include/gcc13/c++/cmath:1108:41: error: 'FP_INFINITE' was not declared in this scope; did you mean 'R_FINITE'?
 1108 |   { return __builtin_fpclassify(FP_NAN, FP_INFINITE, FP_NORMAL,
      |                                         ^~~~~~~~~~~
      |                                         R_FINITE
/opt/local/include/gcc13/c++/cmath:1108:54: error: 'FP_NORMAL' was not declared in this scope; did you mean 'IOPOL_NORMAL'?
 1108 |   { return __builtin_fpclassify(FP_NAN, FP_INFINITE, FP_NORMAL,
      |                                                      ^~~~~~~~~
      |                                                      IOPOL_NORMAL
/opt/local/include/gcc13/c++/cmath:1109:33: error: 'FP_SUBNORMAL' was not declared in this scope
 1109 |                                 FP_SUBNORMAL, FP_ZERO, __x); }
      |                                 ^~~~~~~~~~~~
/opt/local/include/gcc13/c++/cmath:1109:47: error: 'FP_ZERO' was not declared in this scope; did you mean 'NZERO'?
 1109 |                                 FP_SUBNORMAL, FP_ZERO, __x); }
      |                                               ^~~~~~~
      |                                               NZERO
/opt/local/include/gcc13/c++/cmath:1109:62: error: body of 'constexpr' function 'constexpr int std::fpclassify(long double)' not a return-statement
 1109 |                                 FP_SUBNORMAL, FP_ZERO, __x); }
      |                                                              ^
/opt/local/include/gcc13/c++/cmath: In function 'constexpr typename __gnu_cxx::__enable_if<std::__is_integer<_Tp>::__value, int>::__type std::fpclassify(_Tp)':
/opt/local/include/gcc13/c++/cmath:1117:25: error: 'FP_NORMAL' was not declared in this scope; did you mean 'IOPOL_NORMAL'?
 1117 |     { return __x != 0 ? FP_NORMAL : FP_ZERO; }
      |                         ^~~~~~~~~
      |                         IOPOL_NORMAL
/opt/local/include/gcc13/c++/cmath:1117:37: error: 'FP_ZERO' was not declared in this scope; did you mean 'NZERO'?
 1117 |     { return __x != 0 ? FP_NORMAL : FP_ZERO; }
      |                                     ^~~~~~~
      |                                     NZERO
. . .

Perhaps a conflict in headers? The package has a header math.h, which is also a name for a standard system header.

barracuda156 commented 5 months ago

@franzbischoff Could you please take a look?

franzbischoff commented 4 months ago

This error persists?

barracuda156 commented 4 months ago

@franzbischoff Yes, it does:

--->  Configuring R-tsmp
Executing:  cd "/opt/local/var/macports/build/_opt_PPCSnowLeopardPorts_R_R-tsmp/R-tsmp/work/tsmp-0.4.15" && /opt/local/bin/R CMD build . --no-manual --no-build-vignettes --keep-empty-dirs 
* checking for file ‘./DESCRIPTION’ ... OK
* preparing ‘tsmp’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
* building ‘tsmp_0.4.15.tar.gz’

--->  Building R-tsmp
xinstall: mkdir /opt/local/var/macports/build/_opt_PPCSnowLeopardPorts_R_R-tsmp/R-tsmp/work/build
Executing:  cd "/opt/local/var/macports/build/_opt_PPCSnowLeopardPorts_R_R-tsmp/R-tsmp/work/tsmp-0.4.15" && /opt/local/bin/R CMD INSTALL . --library=/opt/local/var/macports/build/_opt_PPCSnowLeopardPorts_R_R-tsmp/R-tsmp/work/build --install-tests 
* installing *source* package ‘tsmp’ ...
** using staged installation
** libs
using C++ compiler: ‘g++-mp-13 (MacPorts gcc13 13.3.0_0+stdlib_flag) 13.3.0’
using C++11
Warning in system2("xcrun", "--show-sdk-path", TRUE, TRUE) :
  running command ''xcrun' --show-sdk-path 2>&1' had status 64
using SDK: ‘NA’‘NA’‘NA’‘NA’‘NA’‘NA’
/opt/local/bin/g++-mp-13 -std=gnu++11 -I"/opt/local/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/Rcpp/include' -I'/opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/RcppParallel/include' -isystem/opt/local/include/LegacySupport -I/opt/local/include    -fPIC  -pipe -Os -arch ppc   -c RcppExports.cpp -o RcppExports.o
/opt/local/bin/g++-mp-13 -std=gnu++11 -I"/opt/local/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/Rcpp/include' -I'/opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/RcppParallel/include' -isystem/opt/local/include/LegacySupport -I/opt/local/include    -fPIC  -pipe -Os -arch ppc   -c math.cpp -o math.o
In file included from /opt/local/include/LegacySupport/cmath:54,
                 from /opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/Rcpp/include/Rcpp/platform/compiler.h:100,
                 from /opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/Rcpp/include/Rcpp/r/headers.h:62,
                 from /opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/Rcpp/include/RcppCommon.h:30,
                 from /opt/local/Library/Frameworks/R.framework/Versions/4.4/Resources/library/Rcpp/include/Rcpp.h:27,
                 from math.h:4,
                 from math.cpp:1:
/opt/local/include/gcc13/c++/cmath:85:11: error: 'acos' has not been declared in '::'
   85 |   using ::acos;
      |           ^~~~
/opt/local/include/gcc13/c++/cmath:104:11: error: 'asin' has not been declared in '::'
  104 |   using ::asin;
      |           ^~~~
/opt/local/include/gcc13/c++/cmath:123:11: error: 'atan' has not been declared in '::'
  123 |   using ::atan;
      |           ^~~~
/opt/local/include/gcc13/c++/cmath:142:11: error: 'atan2' has not been declared in '::'
  142 |   using ::atan2;
      |           ^~~~~
/opt/local/include/gcc13/c++/cmath:154:11: error: 'ceil' has not been declared in '::'
  154 |   using ::ceil;
      |           ^~~~
/opt/local/include/gcc13/c++/cmath:173:11: error: 'cos' has not been declared in '::'
  173 |   using ::cos;
      |           ^~~
/opt/local/include/gcc13/c++/cmath:192:11: error: 'cosh' has not been declared in '::'
  192 |   using ::cosh;
      |           ^~~~
/opt/local/include/gcc13/c++/cmath:211:11: error: 'exp' has not been declared in '::'
  211 |   using ::exp;
      |           ^~~
/opt/local/include/gcc13/c++/cmath:230:11: error: 'fabs' has not been declared in '::'
  230 |   using ::fabs;
      |           ^~~~
/opt/local/include/gcc13/c++/cmath:249:11: error: 'floor' has not been declared in '::'
  249 |   using ::floor;
      |           ^~~~~
/opt/local/include/gcc13/c++/cmath:268:11: error: 'fmod' has not been declared in '::'
  268 |   using ::fmod;
      |           ^~~~
/opt/local/include/gcc13/c++/cmath:280:11: error: 'frexp' has not been declared in '::'
  280 |   using ::frexp;
      |           ^~~~~
/opt/local/include/gcc13/c++/cmath:299:11: error: 'ldexp' has not been declared in '::'
  299 |   using ::ldexp;
      |           ^~~~~
/opt/local/include/gcc13/c++/cmath:318:11: error: 'log' has not been declared in '::'
  318 |   using ::log;
      |           ^~~
/opt/local/include/gcc13/c++/cmath:337:11: error: 'log10' has not been declared in '::'
  337 |   using ::log10;
      |           ^~~~~
/opt/local/include/gcc13/c++/cmath:356:11: error: 'modf' has not been declared in '::'
  356 |   using ::modf;
      |           ^~~~
/opt/local/include/gcc13/c++/cmath:368:11: error: 'pow' has not been declared in '::'
  368 |   using ::pow;
      |           ^~~
/opt/local/include/gcc13/c++/cmath:396:11: error: 'sin' has not been declared in '::'
  396 |   using ::sin;
      |           ^~~
/opt/local/include/gcc13/c++/cmath:415:11: error: 'sinh' has not been declared in '::'
  415 |   using ::sinh;
      |           ^~~~
/opt/local/include/gcc13/c++/cmath:434:11: error: 'sqrt' has not been declared in '::'
  434 |   using ::sqrt;
      |           ^~~~
/opt/local/include/gcc13/c++/cmath:453:11: error: 'tan' has not been declared in '::'
  453 |   using ::tan;
      |           ^~~
/opt/local/include/gcc13/c++/cmath:472:11: error: 'tanh' has not been declared in '::'
  472 |   using ::tanh;
      |           ^~~~
/opt/local/include/gcc13/c++/cmath: In function 'constexpr int std::fpclassify(float)':
/opt/local/include/gcc13/c++/cmath:1098:33: error: 'FP_NAN' was not declared in this scope; did you mean 'ML_NAN'?
 1098 |   { return __builtin_fpclassify(FP_NAN, FP_INFINITE, FP_NORMAL,
      |                                 ^~~~~~
      |                                 ML_NAN
/opt/local/include/gcc13/c++/cmath:1098:41: error: 'FP_INFINITE' was not declared in this scope; did you mean 'R_FINITE'?
 1098 |   { return __builtin_fpclassify(FP_NAN, FP_INFINITE, FP_NORMAL,
      |                                         ^~~~~~~~~~~
      |                                         R_FINITE
/opt/local/include/gcc13/c++/cmath:1098:54: error: 'FP_NORMAL' was not declared in this scope; did you mean 'IOPOL_NORMAL'?
 1098 |   { return __builtin_fpclassify(FP_NAN, FP_INFINITE, FP_NORMAL,
      |                                                      ^~~~~~~~~
      |                                                      IOPOL_NORMAL
/opt/local/include/gcc13/c++/cmath:1099:33: error: 'FP_SUBNORMAL' was not declared in this scope
 1099 |                                 FP_SUBNORMAL, FP_ZERO, __x); }
      |                                 ^~~~~~~~~~~~
/opt/local/include/gcc13/c++/cmath:1099:47: error: 'FP_ZERO' was not declared in this scope; did you mean 'NZERO'?
 1099 |                                 FP_SUBNORMAL, FP_ZERO, __x); }
      |                                               ^~~~~~~
      |                                               NZERO
/opt/local/include/gcc13/c++/cmath:1099:62: error: body of 'constexpr' function 'constexpr int std::fpclassify(float)' not a return-statement
 1099 |                                 FP_SUBNORMAL, FP_ZERO, __x); }
      |                                                              ^
/opt/local/include/gcc13/c++/cmath: In function 'constexpr int std::fpclassify(double)':
/opt/local/include/gcc13/c++/cmath:1103:33: error: 'FP_NAN' was not declared in this scope; did you mean 'ML_NAN'?
 1103 |   { return __builtin_fpclassify(FP_NAN, FP_INFINITE, FP_NORMAL,
      |                                 ^~~~~~
      |                                 ML_NAN
/opt/local/include/gcc13/c++/cmath:1103:41: error: 'FP_INFINITE' was not declared in this scope; did you mean 'R_FINITE'?
 1103 |   { return __builtin_fpclassify(FP_NAN, FP_INFINITE, FP_NORMAL,
      |                                         ^~~~~~~~~~~
      |                                         R_FINITE
/opt/local/include/gcc13/c++/cmath:1103:54: error: 'FP_NORMAL' was not declared in this scope; did you mean 'IOPOL_NORMAL'?
 1103 |   { return __builtin_fpclassify(FP_NAN, FP_INFINITE, FP_NORMAL,
      |                                                      ^~~~~~~~~
      |                                                      IOPOL_NORMAL
/opt/local/include/gcc13/c++/cmath:1104:33: error: 'FP_SUBNORMAL' was not declared in this scope
 1104 |                                 FP_SUBNORMAL, FP_ZERO, __x); }
      |                                 ^~~~~~~~~~~~
/opt/local/include/gcc13/c++/cmath:1104:47: error: 'FP_ZERO' was not declared in this scope; did you mean 'NZERO'?
 1104 |                                 FP_SUBNORMAL, FP_ZERO, __x); }
      |                                               ^~~~~~~
      |                                               NZERO
/opt/local/include/gcc13/c++/cmath:1104:62: error: body of 'constexpr' function 'constexpr int std::fpclassify(double)' not a return-statement
 1104 |                                 FP_SUBNORMAL, FP_ZERO, __x); }
      |                                                              ^
/opt/local/include/gcc13/c++/cmath: In function 'constexpr int std::fpclassify(long double)':
/opt/local/include/gcc13/c++/cmath:1108:33: error: 'FP_NAN' was not declared in this scope; did you mean 'ML_NAN'?
 1108 |   { return __builtin_fpclassify(FP_NAN, FP_INFINITE, FP_NORMAL,
      |                                 ^~~~~~
      |                                 ML_NAN
/opt/local/include/gcc13/c++/cmath:1108:41: error: 'FP_INFINITE' was not declared in this scope; did you mean 'R_FINITE'?
 1108 |   { return __builtin_fpclassify(FP_NAN, FP_INFINITE, FP_NORMAL,
      |                                         ^~~~~~~~~~~
      |                                         R_FINITE
/opt/local/include/gcc13/c++/cmath:1108:54: error: 'FP_NORMAL' was not declared in this scope; did you mean 'IOPOL_NORMAL'?
 1108 |   { return __builtin_fpclassify(FP_NAN, FP_INFINITE, FP_NORMAL,
      |                                                      ^~~~~~~~~
      |                                                      IOPOL_NORMAL
/opt/local/include/gcc13/c++/cmath:1109:33: error: 'FP_SUBNORMAL' was not declared in this scope
 1109 |                                 FP_SUBNORMAL, FP_ZERO, __x); }
      |                                 ^~~~~~~~~~~~
/opt/local/include/gcc13/c++/cmath:1109:47: error: 'FP_ZERO' was not declared in this scope; did you mean 'NZERO'?
 1109 |                                 FP_SUBNORMAL, FP_ZERO, __x); }
      |                                               ^~~~~~~
      |                                               NZERO
/opt/local/include/gcc13/c++/cmath:1109:62: error: body of 'constexpr' function 'constexpr int std::fpclassify(long double)' not a return-statement
 1109 |                                 FP_SUBNORMAL, FP_ZERO, __x); }
      |                                                              ^
/opt/local/include/gcc13/c++/cmath: In function 'constexpr typename __gnu_cxx::__enable_if<std::__is_integer<_Tp>::__value, int>::__type std::fpclassify(_Tp)':
/opt/local/include/gcc13/c++/cmath:1117:25: error: 'FP_NORMAL' was not declared in this scope; did you mean 'IOPOL_NORMAL'?
 1117 |     { return __x != 0 ? FP_NORMAL : FP_ZERO; }
      |                         ^~~~~~~~~
      |                         IOPOL_NORMAL
/opt/local/include/gcc13/c++/cmath:1117:37: error: 'FP_ZERO' was not declared in this scope; did you mean 'NZERO'?
 1117 |     { return __x != 0 ? FP_NORMAL : FP_ZERO; }
      |                                     ^~~~~~~
      |                                     NZERO
. . .
barracuda156 commented 1 month ago

@franzbischoff I am not sure now if I used the master branch last time, but I did now, and from 24c9ff2121436c40b5330c392e072650cf4af1c8 commit I get the same failure.

franzbischoff commented 1 month ago

Unfortunately I had no spare time to fix that yet... sorry @barracuda156 Have you tried to install the built package from CRAN?

barracuda156 commented 1 month ago

Unfortunately I had no spare time to fix that yet... sorry @barracuda156

Have you tried to install the built package from CRAN?

Pre-built option does not work for two reasons: – it does not exist for PowerPC; – for x86 and arm64 we need reproducible builds from source in MacPorts, so grabbing a binary is not really an option (it is done when absolutely required, like when a bootstrap compiler is needed to build itself).