occupied_rates need a fix

matsen / pplacer

Phylogenetic placement and downstream analysis

http://matsen.fredhutch.org/pplacer/

GNU General Public License v3.0

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Closed matsen closed 13 years ago

matsen commented 13 years ago

The implementation is a bit ugly, thanks to yours truly, and occupied_rates is overconservative when using an alignment from a reference package.

habnabit commented 13 years ago

Closed by 95f6eaba9d956fd3c90266c40289b3606f652dc2.