Make an option for only masking columns that are also gap in all reads

matsen / pplacer

Phylogenetic placement and downstream analysis

http://matsen.fredhutch.org/pplacer/

GNU General Public License v3.0

74 stars 18 forks source link

Closed matsen closed 10 years ago

matsen commented 10 years ago

Currently all columns that are completely gap in the reference alignment get masked.

matsen commented 10 years ago

This is no longer relevant given our new approach to masking.