matsen / sbreview

Systematic biology review article on phylogenetics and the human microbiome; associated with LIRMM conference
http://www.lirmm.fr/mceb2013/
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Add OTU generation references #4

Closed b4winckler closed 11 years ago

b4winckler commented 11 years ago

Here are some more references on OTU generation that you could cite at the same time as the CROP paper (Hao et al, 2011).

(in amsrefs format since that's what I use)

\bib{CWC12}{article}{
   author = {Cheng, Lu},
   author = {Walker, Alan W.},
   author = {Corander, Jukka},
    title = {Bayesian estimation of bacterial community composition from 454
             sequencing data},
  journal = {Nucleic Acids Research},
   volume = {40},
   number = {12},
     date = {2012},
    pages = {5240--5249},
      doi = {10.1093/nar/gks227},
}

\bib{KS10}{article}{
   author = {Kelley, David R.},
   author = {Salzberg, Steven L.},
    title = {Clustering metagenomic sequences with interpolated Markov models},
  journal = {BMC Bioinformatics},
   volume = {11},
   number = {544},
     date = {2010},
      doi = {10.1186/1471-2105-11-544},
}

\bib{WYS13}{article}{
   author = {Wang, Xiaoyu},
   author = {Yao, Jin},
   author = {Sun, Yijun},
   author = {Mai, Volker},
    title = {M-pick, a modularity-based method for OTU picking of 16S rRNA
             sequences},
  journal = {BMC Bioinformatics},
   volume = {14},
   number = {43},
     date = {2013},
      doi = {10.1186/1471-2105-14-43},
}