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matsengrp / cft

Clonal family tree
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Compute time analytics #156

Open metasoarous opened 7 years ago

metasoarous commented 7 years ago

I think it would be really nice if we could extract distributions of compute times for various tasks, in particular ancestral state reconstruction, so we can make better decisions about how we downsample. I think SCons might actually record some of this information in its .sconsign.dblite file, so we'd really just have to extract it and do some aggregation to compute some distributions. This probably isn't that high priority a thing. But if we're looking for things to do and the data is in the sconsign already, it might be worthwhile.

metasoarous commented 7 years ago

167 could give us a route forward towards aggregating this information, as it could just be metadata attached to the file target RDF representations.

eharkins commented 5 years ago

https://www.scons.org/doc/3.0.0/HTML/scons-time-man.html could be useful to use built in scons functionality for time measurements if it suits our needs.