matsengrp / cft

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Olmsted frozen deployments #283

Closed matsen closed 5 years ago

matsen commented 5 years ago

Current subjects:

lauradoepker commented 5 years ago

For MG505, I'm interested in: /fh/fast/matsen_e/processed-data/partis/mg505-synth/v20

For QA255, I'm interested in: /fh/fast/matsen_e/processed-data/partis/qa255-synth/v18 /fh/fast/matsen_e/processed-data/partis/qa255-synth/v19 /fh/fast/matsen_e/processed-data/partis/qa255-synth/no-indels

For QA103, Mackenzie is interested in: /fh/fast/matsen_e/processed-data/partis/qa013-mar-8/v19 /fh/fast/matsen_e/processed-data/partis/qa013-synth/v19

eharkins commented 5 years ago

Should have said this earlier, but this should be a https://github.com/matsengrp/olmsted issue. However, do we want to have this same concept for freezing CFT (since it is doing the analyses we see on Olmsted)?

lauradoepker commented 5 years ago

Yes, same concept. I don't care in which repo this issue sits @eharkins 🤷‍♀

eharkins commented 5 years ago

They should each have their own since they are distinct parts of the larger goal. Though cft might not need this issue at all so long as we record which metadata.json (cft output summary) we are processing in Olmsted, since those files contain a cft commit.