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matsengrp / gctree

GCtree: phylogenetic inference of genotype-collapsed trees
https://matsengrp.github.io/gctree
GNU General Public License v3.0
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fix gap character ambiguity bug #118

Closed willdumm closed 1 year ago

willdumm commented 1 year ago

This PR fixes a bug which treated gap characters as ambiguous characters when a later version of the historydag package is installed. This results in gctree infer hanging when run on alignments with many - characters.