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matsengrp
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hyperfreq
Bayesian tool for APOBEC hypermutation analysis
GNU General Public License v3.0
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Still new to python, need some help with writing my own scripts:
#27
mgshapiro100
opened
7 years ago
0
clustering consensus
#26
KMBarton
opened
8 years ago
1
Troubling pulling zip file from github
#25
mgshapiro100
opened
8 years ago
4
Add maxiter setting(s) to CLI
#24
metasoarous
closed
10 years ago
0
Accuracy warnings in log
#23
tsibley
opened
10 years ago
8
Merge in betarat refactor
#22
metasoarous
closed
10 years ago
0
Updated prefixes
#21
metasoarous
closed
10 years ago
0
Change default prefixs to hm_analysis and hm_split
#20
metasoarous
closed
10 years ago
0
Fixed wrong dict key messing up csvwriter
#19
metasoarous
closed
10 years ago
0
17 alncst factor
#18
metasoarous
closed
10 years ago
0
Factor out alnclst code and require as library
#17
metasoarous
closed
10 years ago
0
Get rid of superflous/malformatted quantile output
#16
metasoarous
closed
10 years ago
1
fisher_pvalue is coming out empty for all sequences
#15
metasoarous
closed
10 years ago
0
betarat version requirement for betarat-refactor branch?
#14
tsibley
closed
10 years ago
3
Nevermind
#13
metasoarous
closed
11 years ago
0
Extract output writing code into AnalysisWriter class
#12
metasoarous
closed
10 years ago
0
Add option for ppf values to compute
#11
metasoarous
closed
10 years ago
0
Fix simple dinuclueotide context output?
#10
metasoarous
closed
10 years ago
1
problem running test data
#9
jayoung
closed
10 years ago
7
Interactive Hyperfreq!
#8
metasoarous
closed
10 years ago
0
Fix automatic context negation
#7
metasoarous
closed
10 years ago
1
Make the single nucleotide mutation analysis stats optional
#6
metasoarous
closed
10 years ago
0
Fix splitting on empty hm_columns
#5
metasoarous
closed
10 years ago
0
install - no hyperfreq script installed
#4
jayoung
closed
11 years ago
4
More thorough testing
#3
metasoarous
closed
11 years ago
0
Context based hypermutation patterns
#2
metasoarous
closed
10 years ago
0
error
#1
jayoung
closed
11 years ago
1