Consolidate branch length methods to new Dataset subclass

matsengrp / netam

Neural networks to model BCR affinity maturation

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Consolidate branch length methods to new Dataset subclass #55

Open willdumm opened 2 months ago

willdumm commented 2 months ago

Many Dataset subclasses have duplicated methods like export_branch_lengths, and the branch lengths setter. These should be moved to something called BranchLengthDataset, which can be subclassed by all the classes that currently independently implement these methods.

_Originally posted by @willdumm in https://github.com/matsengrp/netam/pull/50#discussion_r1755328935_

willdumm commented 3 weeks ago

use 55-consolidate-dataset-methods