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matsengrp / vampire

🧛 Deep generative models for TCR sequences 🧛
Apache License 2.0
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Exclude TCRBJ2-5, which Adaptive annotates badly #102

Closed matsen closed 5 years ago

matsen commented 5 years ago

From Adaptive:

A correction to the J02-05/J02-07 annotation issue in TCRB has not been done at this time. The issue resides in our germline annotation process, which has not been updated. We are working on updating this part of our analysis pipeline, but I do not anticipate this change occurring until late in the year. I apologize for any trouble this creates for your work.

matsen commented 5 years ago

We already exclude J2-7 because OLGA doesn't seem to work properly on it.