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mattb112885 / clusterDbAnalysis

ITEP - Integrated Toolkit for Exploration of microbial Pan-genomes
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modularizing commonly used functions #17

Open JamesRH opened 12 years ago

JamesRH commented 12 years ago

Make lib directory Four files:

Need to rewrite existing imports to use new files and update docs

mattb112885 commented 11 years ago

I have started working on this - see the lib/ directory. Treefuncs I've made some pretty good progress on, as well as metadata (but need to update options in some of the functions to use the metadata by default unless someone overrides them for whatever reason). The other ones still need implementing.

JamesRH commented 11 years ago

Do you think it is OK for /scripts to call lib, or only call /src/ (which, in turn call lib). I think direct dependencies are OK but I wanted to check.

James H.

mattb112885 notifications@github.com wrote:

I have started working on this - see the lib/ directory. Treefuncs I've made some pretty good progress on, as well as metadata (but need to update options in some of the functions to use the metadata by default unless someone overrides them for whatever reason). The other ones still need implementing.

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