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mattb112885 / clusterDbAnalysis

ITEP - Integrated Toolkit for Exploration of microbial Pan-genomes
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Need to move other things that make up their own scoring schemes to the standard library functions #36

Open mattb112885 opened 11 years ago

mattb112885 commented 11 years ago

I just wrote library functions to take BLAST results and compute scores in a standard way - but I still have some separate implementations of these floating around in various functions. I need to clean these up (particularly, db_bidirectionalBestHits.py, blastResultsToDistanceMatrix.py ... others?). makeBlastScoreTable.py has already been cleaned up and the recent function for Cytoscape export already was written (recently) to do this properly.