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mattb112885 / clusterDbAnalysis

ITEP - Integrated Toolkit for Exploration of microbial Pan-genomes
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Using version numbers different from existing PubSEED version numbers fails #55

Closed mattb112885 closed 10 years ago

mattb112885 commented 10 years ago

If a user uses convertGenbank2Table.py with a version number (-v) different from the one already inside a genbank file from the PubSEED, the raw file will ignore it and create a raw file whose name does not match the names of the genes inside it.

We need to change this. My suggestion is to ignore -v with a warning if PubSEED identifiers are found and to use those IDs as a basis for naming the file.

mattb112885 commented 10 years ago

This bug should now be fixed in the latest Master branch. Let me know if you have issues. Closing for now.