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mattcieslak / easy_lausanne

Easy creation of Lausanne2008 atlases
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Failure writing scale*/ROI_HR_th.nii.gz #2

Closed jguillon closed 6 years ago

jguillon commented 7 years ago

Hi,

I got error while running easy_lausanne when the folders scale* inside the designated output folder were not existing already.

Here is the kind of log I get:

INFO     : 2017-04-11 19:52:07,275 : main       : ERROR: failure writing ./scale250/ROI_HR_th.nii.gz
CRITICAL : 2017-04-11 19:52:07,275 : runCmd     : Return Value: 1
INFO     : 2017-04-11 19:52:07,277 : main       : Processing somepath/label/ROIv_scale250.nii.gz:
DEBUG    : 2017-04-11 19:52:07,282 : runCmd     : Running: mri_convert -rl "somepath/mri/orig/001.mgz" -rt nearest "somepath/label/ROIv_scale250.nii.gz" -nc "./scale250/ROIv_HR_th.nii.gz"
INFO     : 2017-04-11 19:52:07,791 : main       : mri_convert.bin -rl somepath/mri/orig/001.mgz -rt nearest somepath/label/ROIv_scale250.nii.gz -nc ./scale250/ROIv_HR_th.nii.gz
INFO     : 2017-04-11 19:52:09,813 : main       : niiWrite(): error opening file ./scale250/ROIv_HR_th.nii.gz