matthiasbock / BooleSim

Systems biology tool: Boolean network simulator
http://matthiasbock.github.io/BooleSim
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positive and negative interactions #61

Closed hklarner closed 8 years ago

hklarner commented 8 years ago

just a comment. In the bioinformatics paper you write

This interaction can be positive, which biologically corresponds to stimulation or activation, or negative, which corresponds to inhibition.

but XOR expressions are positive and negative at the same time. In this network:

A = !B && C || B && !C
B = B
C = C

both interactions are positive and negative.

matthiasbock commented 8 years ago

I know. Thank you.