Open DeepaMahm opened 4 years ago
Hi @matthiaskoenig Source code: example.py
While parsing proteins by taxonomy using parse_proteins_by_taxonomy() function defined in the above file , the following output is displayed for ec = "1.1.1.1"
parse_proteins_by_taxonomy()
ec = "1.1.1.1"
protein_id organism taxonomy common_name common_dist 23 12 Oryctolagus cuniculus 9986 Euarchontoglires 9 153 9 Rattus norvegicus 10116 Euarchontoglires 9 78 2 Cricetulus griseus 10029 Euarchontoglires 9 111 5 Mus musculus 10090 Euarchontoglires 9 96 36 Mesocricetus auratus 10036 Euarchontoglires 9 19 116 Mus musculus 10090 Euarchontoglires 9
The common names are the same for all the above organisms. Could you please look into this?
Hi @matthiaskoenig Source code: example.py
While parsing proteins by taxonomy using
parse_proteins_by_taxonomy()
function defined in the above file , the following output is displayed forec = "1.1.1.1"
The common names are the same for all the above organisms. Could you please look into this?