search

matthiaskoenig / pkdb

Pharmacokinetics database
https://alpha.pk-db.com
30 stars 6 forks source link

debug error in staging and production #417

Closed janekg89 closed 5 years ago

janekg89 commented 5 years ago

https://develop.pk-db.com/api/ 

AttributeError at /api/
'AutoSchema' object has no attribute 'get_link'

Request Method: GET
Request URL: http://develop.pk-db.com/api/
Django Version: 2.2.3
Python Executable: /usr/local/bin/python
Python Version: 3.6.9
Python Path: ['/usr/local/bin', '/usr/local/lib/python36.zip', '/usr/local/lib/python3.6', '/usr/local/lib/python3.6/lib-dynload', '/usr/local/lib/python3.6/site-packages', '/src/django-elasticsearch-dsl-drf/src', '/code']
Server time: Wed, 31 Jul 2019 15:39:56 +0000
Installed Applications:
('django.contrib.admin',
 'django.contrib.auth',
 'django.contrib.sites',
 'django.contrib.contenttypes',
 'django.contrib.sessions',
 'django.contrib.messages',
 'django.contrib.staticfiles',
 'rest_email_auth',
 'rest_framework.authtoken',
 'allauth',
 'allauth.account',
 'rest_framework',
 'django_filters',
 'rest_framework_swagger',
 'corsheaders',
 'django_elasticsearch_dsl',
 'django_elasticsearch_dsl_drf',
 'pkdb_app.users',
 'pkdb_app.studies',
 'pkdb_app.categorials',
 'pkdb_app.subjects',
 'pkdb_app.substances',
 'pkdb_app.interventions',
 'pkdb_app.outputs',
 'pkdb_app.comments')
Installed Middleware:
('django.middleware.security.SecurityMiddleware',
 'django.contrib.sessions.middleware.SessionMiddleware',
 'corsheaders.middleware.CorsMiddleware',
 'django.middleware.common.CommonMiddleware',
 'django.middleware.csrf.CsrfViewMiddleware',
 'django.contrib.auth.middleware.AuthenticationMiddleware',
 'django.contrib.messages.middleware.MessageMiddleware',
 'django.middleware.clickjacking.XFrameOptionsMiddleware')

Traceback:

File "/usr/local/lib/python3.6/site-packages/django/core/handlers/exception.py" in inner
  34.             response = get_response(request)

File "/usr/local/lib/python3.6/site-packages/django/core/handlers/base.py" in _get_response
  115.                 response = self.process_exception_by_middleware(e, request)

File "/usr/local/lib/python3.6/site-packages/django/core/handlers/base.py" in _get_response
  113.                 response = wrapped_callback(request, *callback_args, **callback_kwargs)

File "/usr/local/lib/python3.6/site-packages/django/views/decorators/csrf.py" in wrapped_view
  54.         return view_func(*args, **kwargs)

File "/usr/local/lib/python3.6/site-packages/django/views/generic/base.py" in view
  71.             return self.dispatch(request, *args, **kwargs)

File "/usr/local/lib/python3.6/site-packages/rest_framework/views.py" in dispatch
  497.             response = self.handle_exception(exc)

File "/usr/local/lib/python3.6/site-packages/rest_framework/views.py" in handle_exception
  457.             self.raise_uncaught_exception(exc)

File "/usr/local/lib/python3.6/site-packages/rest_framework/views.py" in raise_uncaught_exception
  468.         raise exc

File "/usr/local/lib/python3.6/site-packages/rest_framework/views.py" in dispatch
  494.             response = handler(request, *args, **kwargs)

File "/usr/local/lib/python3.6/site-packages/rest_framework_swagger/views.py" in get
  32.             schema = generator.get_schema(request=request)

File "/usr/local/lib/python3.6/site-packages/rest_framework/schemas/coreapi.py" in get_schema
  164.         links = self.get_links(None if public else request)

File "/usr/local/lib/python3.6/site-packages/rest_framework/schemas/coreapi.py" in get_links
  151.             link = view.schema.get_link(path, method, base_url=self.url)

Exception Type: AttributeError at /api/
Exception Value: 'AutoSchema' object has no attribute 'get_link'
Request information:
USER: AnonymousUser

GET: No GET data

POST: No POST data

FILES: No FILES data

COOKIES:
csrftoken = 'jPZYkiyXeDkwSkycn2KnxGzAIMqxcpkY8zBAWAjIlNgT5lf0fb3NM0tCZJvUh4h1'

META:
CSRF_COOKIE = 'jPZYkiyXeDkwSkycn2KnxGzAIMqxcpkY8zBAWAjIlNgT5lf0fb3NM0tCZJvUh4h1'
HTTP_ACCEPT = 'text/html,application/xhtml+xml,application/xml;q=0.9,*/*;q=0.8'
HTTP_ACCEPT_ENCODING = 'gzip, deflate, br'
HTTP_ACCEPT_LANGUAGE = 'en-US,en;q=0.5'
HTTP_CONNECTION = 'close'
HTTP_COOKIE = 'csrftoken=jPZYkiyXeDkwSkycn2KnxGzAIMqxcpkY8zBAWAjIlNgT5lf0fb3NM0tCZJvUh4h1'
HTTP_HOST = 'develop.pk-db.com'
HTTP_UPGRADE_INSECURE_REQUESTS = '1'
HTTP_USER_AGENT = 'Mozilla/5.0 (X11; Ubuntu; Linux x86_64; rv:68.0) Gecko/20100101 Firefox/68.0'
HTTP_X_FORWARDED_FOR = '141.20.65.246, 172.107.0.1'
HTTP_X_FORWARDED_PROTO = 'https'
HTTP_X_REAL_IP = '141.20.65.246'
PATH_INFO = '/api/'
QUERY_STRING = ''
RAW_URI = '/api/'
REMOTE_ADDR = '172.21.0.6'
REMOTE_PORT = '56176'
REQUEST_METHOD = 'GET'
SCRIPT_NAME = ''
SERVER_NAME = '0.0.0.0'
SERVER_PORT = '8000'
SERVER_PROTOCOL = 'HTTP/1.0'
SERVER_SOFTWARE = 'gunicorn/19.9.0'
gunicorn.socket = <socket.socket fd=8, family=AddressFamily.AF_INET, type=SocketKind.SOCK_STREAM, proto=0, laddr=('172.21.0.5', 8000), raddr=('172.21.0.6', 56176)>
wsgi.errors = <gunicorn.http.wsgi.WSGIErrorsWrapper object at 0x7f5ce3a0a3c8>
wsgi.file_wrapper = ''
wsgi.input = <gunicorn.http.body.Body object at 0x7f5ce3a0a940>
wsgi.multiprocess = True
wsgi.multithread = False
wsgi.run_once = False
wsgi.url_scheme = 'http'
wsgi.version = '(1, 0)'

Settings:
Using settings module pkdb_app.settings
ABSOLUTE_URL_OVERRIDES = {}
ACCOUNT_AUTHENTICATED_LOGIN_REDIRECTS = False
ACCOUNT_AUTHENTICATION_METHOD = 'email'
ACCOUNT_EMAIL_REQUIRED = True
ACCOUNT_EMAIL_VERIFICATION = 'mandatory'
ACCOUNT_LOGOUT_REDIRECT_URL = 'http://0.0.0.0:8000/#/account'
ACCOUNT_USERNAME_MIN_LENGTH = 3
ACCOUNT_USERNAME_REQUIRED = True
ADMINS = "(('mkoenig', 'konigmatt@googlemail.com'), ('janekg89', 'janekg89@hotmail.de'))"
ALLOWED_HOSTS = ['*']
API_BASE = '********************'
API_URL = '********************'
APPEND_SLASH = False
AUTHENTICATION_BACKENDS = "('django.contrib.auth.backends.ModelBackend', 'allauth.account.auth_backends.AuthenticationBackend', 'rest_email_auth.authentication.VerifiedEmailBackend')"
AUTH_PASSWORD_VALIDATORS = '********************'
AUTH_USER_MODEL = 'users.User'
BASE_DIR = '/code'
CACHES = {'default': {'BACKEND': 'django.core.cache.backends.locmem.LocMemCache'}}
CACHE_MIDDLEWARE_ALIAS = 'default'
CACHE_MIDDLEWARE_KEY_PREFIX = '********************'
CACHE_MIDDLEWARE_SECONDS = 600
CORS_ORIGIN_ALLOW_ALL = True
CSRF_COOKIE_AGE = 31449600
CSRF_COOKIE_DOMAIN = None
CSRF_COOKIE_HTTPONLY = False
CSRF_COOKIE_NAME = 'csrftoken'
CSRF_COOKIE_PATH = '/'
CSRF_COOKIE_SAMESITE = 'Lax'
CSRF_COOKIE_SECURE = False
CSRF_FAILURE_VIEW = 'django.views.csrf.csrf_failure'
CSRF_HEADER_NAME = 'HTTP_X_CSRFTOKEN'
CSRF_TRUSTED_ORIGINS = []
CSRF_USE_SESSIONS = False
DATABASES = {'default': {'ENGINE': 'django.db.backends.postgresql', 'NAME': 'postgres', 'USER': 'postgres', 'HOST': 'postgres', 'PASSWORD': '********************', 'PORT': '5432', 'ATOMIC_REQUESTS': False, 'AUTOCOMMIT': True, 'CONN_MAX_AGE': 0, 'OPTIONS': {}, 'TIME_ZONE': None, 'TEST': {'CHARSET': None, 'COLLATION': None, 'NAME': None, 'MIRROR': None}}}
DATABASE_ROUTERS = []
DATA_UPLOAD_MAX_MEMORY_SIZE = 2621440
DATA_UPLOAD_MAX_NUMBER_FIELDS = 1000
DATETIME_FORMAT = 'N j, Y, P'
DATETIME_INPUT_FORMATS = ['%Y-%m-%d %H:%M:%S', '%Y-%m-%d %H:%M:%S.%f', '%Y-%m-%d %H:%M', '%Y-%m-%d', '%m/%d/%Y %H:%M:%S', '%m/%d/%Y %H:%M:%S.%f', '%m/%d/%Y %H:%M', '%m/%d/%Y', '%m/%d/%y %H:%M:%S', '%m/%d/%y %H:%M:%S.%f', '%m/%d/%y %H:%M', '%m/%d/%y']
DATE_FORMAT = 'N j, Y'
DATE_INPUT_FORMATS = ['%Y-%m-%d', '%m/%d/%Y', '%m/%d/%y', '%b %d %Y', '%b %d, %Y', '%d %b %Y', '%d %b, %Y', '%B %d %Y', '%B %d, %Y', '%d %B %Y', '%d %B, %Y']
DEBUG = True
DEBUG_PROPAGATE_EXCEPTIONS = False
DECIMAL_SEPARATOR = '.'
DEFAULT_CHARSET = 'utf-8'
DEFAULT_CONTENT_TYPE = 'text/html'
DEFAULT_EXCEPTION_REPORTER_FILTER = 'django.views.debug.SafeExceptionReporterFilter'
DEFAULT_FILE_STORAGE = 'django.core.files.storage.FileSystemStorage'
DEFAULT_FROM_EMAIL = 'webmaster@localhost'
DEFAULT_INDEX_TABLESPACE = ''
DEFAULT_TABLESPACE = ''
DISALLOWED_USER_AGENTS = []
DJANGO_CONFIGURATION = 'local'
ELASTICSEARCH_DSL = {'default': {'hosts': 'elasticsearch:9200'}}
EMAIL_BACKEND = 'django.core.mail.backends.console.EmailBackend'
EMAIL_HOST = 'localhost'
EMAIL_HOST_PASSWORD = '********************'
EMAIL_HOST_USER = ''
EMAIL_PORT = 1025
EMAIL_SSL_CERTFILE = None
EMAIL_SSL_KEYFILE = '********************'
EMAIL_SUBJECT_PREFIX = '[Django] '
EMAIL_TIMEOUT = None
EMAIL_USE_LOCALTIME = False
EMAIL_USE_SSL = False
EMAIL_USE_TLS = False
FILE_CHARSET = 'utf-8'
FILE_UPLOAD_DIRECTORY_PERMISSIONS = None
FILE_UPLOAD_HANDLERS = ['django.core.files.uploadhandler.MemoryFileUploadHandler', 'django.core.files.uploadhandler.TemporaryFileUploadHandler']
FILE_UPLOAD_MAX_MEMORY_SIZE = 2621440
FILE_UPLOAD_PERMISSIONS = None
FILE_UPLOAD_TEMP_DIR = None
FIRST_DAY_OF_WEEK = 0
FIXTURE_DIRS = []
FORCE_SCRIPT_NAME = None
FORMAT_MODULE_PATH = None
FORM_RENDERER = 'django.forms.renderers.DjangoTemplates'
FRONTEND_BASE = 'http://0.0.0.0:8080'
IGNORABLE_404_URLS = []
INSTALLED_APPS = "('django.contrib.admin', 'django.contrib.auth', 'django.contrib.sites', 'django.contrib.contenttypes', 'django.contrib.sessions', 'django.contrib.messages', 'django.contrib.staticfiles', 'rest_email_auth', 'rest_framework.authtoken', 'allauth', 'allauth.account', 'rest_framework', 'django_filters', 'rest_framework_swagger', 'corsheaders', 'django_elasticsearch_dsl', 'django_elasticsearch_dsl_drf', 'pkdb_app.users', 'pkdb_app.studies', 'pkdb_app.categorials', 'pkdb_app.subjects', 'pkdb_app.substances', 'pkdb_app.interventions', 'pkdb_app.outputs', 'pkdb_app.comments')"
INTERNAL_IPS = '()'
LANGUAGES = [('af', 'Afrikaans'), ('ar', 'Arabic'), ('ast', 'Asturian'), ('az', 'Azerbaijani'), ('bg', 'Bulgarian'), ('be', 'Belarusian'), ('bn', 'Bengali'), ('br', 'Breton'), ('bs', 'Bosnian'), ('ca', 'Catalan'), ('cs', 'Czech'), ('cy', 'Welsh'), ('da', 'Danish'), ('de', 'German'), ('dsb', 'Lower Sorbian'), ('el', 'Greek'), ('en', 'English'), ('en-au', 'Australian English'), ('en-gb', 'British English'), ('eo', 'Esperanto'), ('es', 'Spanish'), ('es-ar', 'Argentinian Spanish'), ('es-co', 'Colombian Spanish'), ('es-mx', 'Mexican Spanish'), ('es-ni', 'Nicaraguan Spanish'), ('es-ve', 'Venezuelan Spanish'), ('et', 'Estonian'), ('eu', 'Basque'), ('fa', 'Persian'), ('fi', 'Finnish'), ('fr', 'French'), ('fy', 'Frisian'), ('ga', 'Irish'), ('gd', 'Scottish Gaelic'), ('gl', 'Galician'), ('he', 'Hebrew'), ('hi', 'Hindi'), ('hr', 'Croatian'), ('hsb', 'Upper Sorbian'), ('hu', 'Hungarian'), ('hy', 'Armenian'), ('ia', 'Interlingua'), ('id', 'Indonesian'), ('io', 'Ido'), ('is', 'Icelandic'), ('it', 'Italian'), ('ja', 'Japanese'), ('ka', 'Georgian'), ('kab', 'Kabyle'), ('kk', 'Kazakh'), ('km', 'Khmer'), ('kn', 'Kannada'), ('ko', 'Korean'), ('lb', 'Luxembourgish'), ('lt', 'Lithuanian'), ('lv', 'Latvian'), ('mk', 'Macedonian'), ('ml', 'Malayalam'), ('mn', 'Mongolian'), ('mr', 'Marathi'), ('my', 'Burmese'), ('nb', 'Norwegian Bokmål'), ('ne', 'Nepali'), ('nl', 'Dutch'), ('nn', 'Norwegian Nynorsk'), ('os', 'Ossetic'), ('pa', 'Punjabi'), ('pl', 'Polish'), ('pt', 'Portuguese'), ('pt-br', 'Brazilian Portuguese'), ('ro', 'Romanian'), ('ru', 'Russian'), ('sk', 'Slovak'), ('sl', 'Slovenian'), ('sq', 'Albanian'), ('sr', 'Serbian'), ('sr-latn', 'Serbian Latin'), ('sv', 'Swedish'), ('sw', 'Swahili'), ('ta', 'Tamil'), ('te', 'Telugu'), ('th', 'Thai'), ('tr', 'Turkish'), ('tt', 'Tatar'), ('udm', 'Udmurt'), ('uk', 'Ukrainian'), ('ur', 'Urdu'), ('vi', 'Vietnamese'), ('zh-hans', 'Simplified Chinese'), ('zh-hant', 'Traditional Chinese')]
LANGUAGES_BIDI = ['he', 'ar', 'fa', 'ur']
LANGUAGE_CODE = 'en-us'
LANGUAGE_COOKIE_AGE = None
LANGUAGE_COOKIE_DOMAIN = None
LANGUAGE_COOKIE_NAME = 'django_language'
LANGUAGE_COOKIE_PATH = '/'
LOCALE_PATHS = []
LOGGING = {'version': 1, 'disable_existing_loggers': False, 'formatters': {'django.server': {'()': 'django.utils.log.ServerFormatter', 'format': '[%(server_time)s] %(message)s'}, 'verbose': {'format': '%(levelname)s %(asctime)s %(module)s %(process)d %(thread)d %(message)s'}, 'simple': {'format': '%(levelname)s %(message)s'}}, 'filters': {'require_debug_true': {'()': 'django.utils.log.RequireDebugTrue'}}, 'handlers': {'django.server': {'level': 'INFO', 'class': 'logging.StreamHandler', 'formatter': 'django.server'}, 'console': {'level': 'DEBUG', 'class': 'logging.StreamHandler', 'formatter': 'simple'}, 'mail_admins': {'level': 'ERROR', 'class': 'django.utils.log.AdminEmailHandler'}}, 'loggers': {'django': {'handlers': ['console'], 'propagate': True}, 'django.server': {'handlers': ['django.server'], 'level': 'INFO', 'propagate': False}, 'django.request': {'handlers': ['mail_admins', 'console'], 'level': 'ERROR', 'propagate': False}, 'django.db.backends': {'handlers': ['console'], 'level': 'INFO'}}}
LOGGING_CONFIG = 'logging.config.dictConfig'
LOGIN_REDIRECT_URL = 'http://0.0.0.0:8000/#/account'
LOGIN_URL = 'http://0.0.0.0:8000/#/account'
LOGOUT_REDIRECT_URL = None
LOGOUT_URL = 'rest_framework:logout'
MANAGERS = []
MEDIA_ROOT = '/media/'
MEDIA_URL = '/media/'
MESSAGE_STORAGE = 'django.contrib.messages.storage.fallback.FallbackStorage'
MIDDLEWARE = "('django.middleware.security.SecurityMiddleware', 'django.contrib.sessions.middleware.SessionMiddleware', 'corsheaders.middleware.CorsMiddleware', 'django.middleware.common.CommonMiddleware', 'django.middleware.csrf.CsrfViewMiddleware', 'django.contrib.auth.middleware.AuthenticationMiddleware', 'django.contrib.messages.middleware.MessageMiddleware', 'django.middleware.clickjacking.XFrameOptionsMiddleware')"
MIGRATION_MODULES = {}
MONTH_DAY_FORMAT = 'F j'
NUMBER_GROUPING = 0
PASSWORD_HASHERS = '********************'
PASSWORD_RESET_TIMEOUT_DAYS = '********************'
PREPEND_WWW = False
REST_EMAIL_AUTH = {'EMAIL_VERIFICATION_URL': 'http://0.0.0.0:8080/#/verification/{key}', 'PASSWORD_RESET_URL': '********************', 'EMAIL_VERIFICATION_PASSWORD_REQUIRED': '********************', 'REGISTRATION_SERIALIZER': 'pkdb_app.users.serializers.UserRegistrationSerializer'}
REST_FRAMEWORK = {'DEFAULT_PAGINATION_CLASS': 'pkdb_app.pagination.CustomPagination', 'PAGE_SIZE': 20, 'PAGINATE_BY': 10, 'PAGINATE_BY_PARAM': 'page_size', 'MAX_PAGINATE_BY': 100, 'DATETIME_FORMAT': '%Y-%m-%dT%H:%M:%S%z', 'DEFAULT_RENDERER_CLASSES': ('rest_framework.renderers.JSONRenderer', 'rest_framework.renderers.BrowsableAPIRenderer'), 'DEFAULT_AUTHENTICATION_CLASSES': ('rest_framework.authentication.SessionAuthentication', 'rest_framework.authentication.TokenAuthentication'), 'DEFAULT_FILTER_BACKENDS': ('django_filters.rest_framework.DjangoFilterBackend',)}
ROOT_URLCONF = 'pkdb_app.urls'
SECRET_KEY = '********************'
SECURE_BROWSER_XSS_FILTER = False
SECURE_CONTENT_TYPE_NOSNIFF = False
SECURE_HSTS_INCLUDE_SUBDOMAINS = False
SECURE_HSTS_PRELOAD = False
SECURE_HSTS_SECONDS = 0
SECURE_PROXY_SSL_HEADER = None
SECURE_REDIRECT_EXEMPT = []
SECURE_SSL_HOST = None
SECURE_SSL_REDIRECT = False
SERVER_EMAIL = 'root@localhost'
SESSION_CACHE_ALIAS = 'default'
SESSION_COOKIE_AGE = 1209600
SESSION_COOKIE_DOMAIN = None
SESSION_COOKIE_HTTPONLY = True
SESSION_COOKIE_NAME = 'sessionid'
SESSION_COOKIE_PATH = '/'
SESSION_COOKIE_SAMESITE = 'Lax'
SESSION_COOKIE_SECURE = False
SESSION_ENGINE = 'django.contrib.sessions.backends.db'
SESSION_EXPIRE_AT_BROWSER_CLOSE = False
SESSION_FILE_PATH = None
SESSION_SAVE_EVERY_REQUEST = False
SESSION_SERIALIZER = 'django.contrib.sessions.serializers.JSONSerializer'
SETTINGS_MODULE = 'pkdb_app.settings'
SHORT_DATETIME_FORMAT = 'm/d/Y P'
SHORT_DATE_FORMAT = 'm/d/Y'
SIGNING_BACKEND = 'django.core.signing.TimestampSigner'
SILENCED_SYSTEM_CHECKS = []
SITE_ID = 1
STATICFILES_DIRS = ['/code/pkdb_app/static']
STATICFILES_FINDERS = "('django.contrib.staticfiles.finders.FileSystemFinder', 'django.contrib.staticfiles.finders.AppDirectoriesFinder')"
STATICFILES_STORAGE = 'django.contrib.staticfiles.storage.StaticFilesStorage'
STATIC_ROOT = '/static'
STATIC_URL = '/static/'
SWAGGER_SETTINGS = {'LOGIN_URL': 'rest_framework:login', 'LOGOUT_URL': 'rest_framework:logout', 'USE_SESSION_AUTH': True, 'DOC_EXPANSION': 'list', 'APIS_SORTER': '********************', 'SECURITY_DEFINITIONS': {'basic': {'type': 'basic'}}}
TEMPLATES = [{'BACKEND': 'django.template.backends.django.DjangoTemplates', 'DIRS': ['/code/pkdb_app/static', '/code/pkdb_app/templates'], 'APP_DIRS': True, 'OPTIONS': {'context_processors': ['django.template.context_processors.debug', 'django.template.context_processors.request', 'django.contrib.auth.context_processors.auth', 'django.contrib.messages.context_processors.messages']}}]
TEST_NON_SERIALIZED_APPS = []
TEST_RUNNER = 'django.test.runner.DiscoverRunner'
THOUSAND_SEPARATOR = ','
TIME_FORMAT = 'P'
TIME_INPUT_FORMATS = ['%H:%M:%S', '%H:%M:%S.%f', '%H:%M']
TIME_ZONE = 'UTC'
USE_I18N = False
USE_L10N = True
USE_THOUSAND_SEPARATOR = False
USE_TZ = True
USE_X_FORWARDED_HOST = False
USE_X_FORWARDED_PORT = False
WSGI_APPLICATION = 'pkdb_app.wsgi.application'
X_FRAME_OPTIONS = 'SAMEORIGIN'
YEAR_MONTH_FORMAT = 'F Y'

You're seeing this error because you have DEBUG = True in your
Django settings file. Change that to False, and Django will
display a standard page generated by the handler for this status code.
janekg89 commented 5 years ago

error is resolved. however, debug mode should be turned off anyway.

matthiaskoenig commented 5 years ago

This is deployed. Will open a dedicated issue for the debug mode