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maxbiostat / R0_uncertainty

Some remarks on prior modelling for the basic reproductive number in the Susceptible-Infected-Recovered (SIR) epidemic model
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Implement log version of SIR #28

Open maxbiostat opened 4 years ago

maxbiostat commented 4 years ago

Exploit the fact that dlog(y)/dt = 1/y dy/dt to reparametrise the ODE systems we use and see if this leads to better geometry and/or faster sampling.

maxbiostat commented 4 years ago

@marciomacielbastos , this is the issue we talked about. We can try and see if this parametrisation leads to computational and statistical gains. See also #30 .