Experiment 2: single ODE parametrisation - Githubissues

maxbiostat / R0_uncertainty

Some remarks on prior modelling for the basic reproductive number in the Susceptible-Infected-Recovered (SIR) epidemic model

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Experiment 2: single ODE parametrisation #38

Open maxbiostat opened 3 years ago

maxbiostat commented 3 years ago

b) Does using a single ODE parametrisation help?

To answer b) we could

Run the single ODE model with the same (informative and uniformative) priors on R0 as in #37 and then record the quantities of interest:

Quantities to track
- Mean, median and BCI;
- Divergences;
- ESS;
- Run time.