Required post-assembly tools - Githubissues

maxibor / madman

Metagenomic Assembly of Ancient DaMaged reads with Nextflow

MIT License

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Required post-assembly tools #14

Closed jfy133 closed 3 years ago

jfy133 commented 3 years ago

[x] pydamage
[x] damageprofiler
[x] quast
[x] bcftools/view
[x] bcftools/index
[x] bowtie2
[x] prokka
[x] samtools/index

maxibor commented 3 years ago

[x] freebayes https://github.com/nf-core/modules/pull/818