Closed drbecavin closed 2 years ago
Hello @drbecavin !
Yes, the desc.conf is still used to control the abstract, methods, etc. for your dataset.
Can you provide more details about the issue you're running into?
A few things it might be:
First of all when running the cbBuild,n I got this:
cbBuild -i cellbrowser.conf -o /ipmc/......../HCA
INFO:root:Loading settings from cellbrowser.conf
INFO:root:/home/becavin/hca/summary.html does not exist
INFO:root:/home/becavin/hca/methods.html does not exist
INFO:root:/home/becavin/hca/downloads.html does not exist
INFO:root:Getting md5 of /home/becavin/hca/metadata_FINAL_corrected.tsv
Should I get something like INFO:root:Loading settings from desc.conf
?
Those three files (summary/methods/downloads.html) were the previous way of describing a dataset and its download files. However, those were replaced with desc.conf quite a few versions ago. The latest pip version (0.7.7, I think) should be looking for the desc.conf file.
What version of the "cellbrowser" package do you have installed?
Hi, @drbecavin!
Is this still a problem? If not, maybe we can close this issue.
Thanks!
I'm going to close this issue, but please feel free to re-open if you feel something is still unaddressed here.
Hello, To create my cellbrowser I was trying to use desc.conf as mentionned in the readthedoc Is it still a thing ? Does not seem to be taken into consideration. Thanks