Closed pcm32 closed 3 years ago
Would it be possible to get a release after this is merged @maximilianh ? I have tested that with this fix our dataset works.
Oh interesting. this has never come up before. Thanks!
Should this have fixed the UCSC browser issue? I'm using this: (Galaxy Version 0.7.10+galaxy0). Still no luck...
We have not released yet, sorry.
On Thu, Mar 25, 2021 at 1:18 PM Wendi Bacon @.***> wrote:
Should this have fixed the UCSC browser issue? I'm using this: (Galaxy Version 0.7.10+galaxy0). Still no luck...
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The reason is an open bug in the violin plot display
On Thu, Mar 25, 2021 at 2:23 PM Maximilian Haeussler @.***> wrote:
We have not released yet, sorry.
On Thu, Mar 25, 2021 at 1:18 PM Wendi Bacon @.***> wrote:
Should this have fixed the UCSC browser issue? I'm using this: (Galaxy Version 0.7.10+galaxy0). Still no luck...
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Hi @maximilianh, any chance for a release soon that includes this? Thanks!
Hi Pablo, another bug came up. I'm trying to get everything now, but just in case: Would it be OK to do just a pip release? How important is the violin plot feature for you?
On Tue, Apr 6, 2021 at 12:29 PM Pablo Moreno @.***> wrote:
Hi @maximilianh https://github.com/maximilianh, any chance for a release soon that includes this? Thanks!
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For us a pip release is fine, since that should trigger the bioconda auto bump. @nomadscientist is the violin plot bug relevant to what you need to show? Could you point us @maximilianh to a description of this bug to understand whether we can live without it or not? Thanks!
@pcm32 Bug:
Compare this behavior with our main site: https://cells.ucsc.edu/?ds=cortex-dev&gene=HES1.
OK, the violin thing is fixed. Matt, can we live with the labels bug for now? Or is that essential, too?
On Mon, Apr 12, 2021 at 7:03 PM Matt Speir @.***> wrote:
@pcm32 https://github.com/pcm32 Bug:
- Go to our dev site: https://cells-test.gi.ucsc.edu/?ds=cortex-dev&gene=HES1 (coloring a plot by a gene)
- Switch cursor to rectangle select
- Select some cells
- Notice that violin plot below legend doesn't appear
Compare this behavior with our main site: https://cells.ucsc.edu/?ds=cortex-dev&gene=HES1.
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No, I think we're good to go.
Aims to deal with #208