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maximilianh / cellBrowser

main repo: https://github.com/ucscGenomeBrowser/cellBrowser/ - Python pipeline and Javascript scatter plot library for single-cell datasets, http://cellbrowser.rtfd.org
https://github.com/ucscGenomeBrowser/cellBrowser/
GNU General Public License v3.0
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Split view by dataset #253

Open michael-kotliar opened 1 year ago

michael-kotliar commented 1 year ago

Hello! Is there any functionality in the browser that would allow to split the view by dataset or, let's say, by time point? We have data aggregated from 4 time points and would like to visualize them side by side.

Thanks a lot, Michael

maximilianh commented 1 year ago

Hi Michael, hmmm, that's a cool idea, I could add that... are these big datasets? And are these datasets on our site cells.ucsc.edu or some other website?

Right now, you can actually do it like this: integrate the four datasets, split the umap coordinates by time point, activate split screen mode and select one timepoint on each split screen side. But that's somewhat convoluted.

I appreciate any ideas on how to make this user interface for split screen mode better. No one can find it. I think we may need a more prominent button somewhere... e.g. when you search for a gene, have a big "split screen on this gene" button or something like that...?

On Fri, Oct 7, 2022 at 6:50 PM Michael Kotliar @.***> wrote:

Hello! Is there any functionality in the browser that would allow to split the view by dataset or, let's say, by time point? We have data aggregated from 4 time points and would like to visualize them side by side.

Thanks a lot, Michael

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