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maxplanck-ie / HiCAssembler

Software to assemble contigs/scaffolds into chromosomes using Hi-C data
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SyntaxError: invalid syntax #9

Open zhuangfjnu opened 5 years ago

zhuangfjnu commented 5 years ago

Hi Fidel, After I installed HiCAssembler, I get this error $assemble Traceback (most recent call last): File "/share/bioinfo/anaconda3/bin/assemble", line 11, in import hicassembler.HiCAssembler as HiCAssembler File "/share/bioinfo/anaconda3/lib/python3.6/site-packages/hicassembler/HiCAssembler.py", line 346 for node, degree in sorted(node_degree_mst.iteritems(), key=lambda (k, v): v, reverse=True): ^ SyntaxError: invalid syntax

Could you give some suggestion about how to fix it ?

Thanks, Zhen

fidelram commented 5 years ago

Try with python 2

Fidel Ramírez

On 2 Mar 2019, at 17:50, zhuangfjnu notifications@github.com wrote:

Hi Fidel, After I installed HiCAssembler, I get this error $assemble Traceback (most recent call last): File "/share/bioinfo/anaconda3/bin/assemble", line 11, in import hicassembler.HiCAssembler as HiCAssembler File "/share/bioinfo/anaconda3/lib/python3.6/site-packages/hicassembler/HiCAssembler.py", line 346 for node, degree in sorted(node_degree_mst.iteritems(), key=lambda (k, v): v, reverse=True): ^ SyntaxError: invalid syntax

Could you give some suggestion about how to fix it ?

Thanks, Zhen

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