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maxplanck-ie
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snakepipes
Customizable workflows based on snakemake and python for the analysis of NGS data
http://snakepipes.readthedocs.io
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pairtools - todos
#1026
Closed
WardDeb
closed
1 month ago
WardDeb
commented
4 months ago
Todo's for pairtools wf:
[x] basic implementation
[x] CI/CD tests for wf
[x] optional / required args for wf should be revisited -> vcffile / strains
[x] bulk mode implementation
[x] implement additional rules
https://github.com/caballero/snakemake-pairtools-phased
Todo's for pairtools wf: