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maxplanck-ie
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snakepipes
Customizable workflows based on snakemake and python for the analysis of NGS data
http://snakepipes.readthedocs.io
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changes in STAR command and version
#873
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LeilyR
closed
1 year ago
LeilyR
commented
1 year ago
STAR 2.7.10a seems to have bug which return seg. fault, I have faced it while running mRNA pipeline, therefore I bumped its version.
There is no need to have
< gunzip
, because STAR offers a param for that, so Fixed the command line there too.
I have added the python version to the shared.yaml since the used version of deeptools is not compatible with the latest version python
< gunzip
, because STAR offers a param for that, so Fixed the command line there too.