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maxplanck-ie / snakepipes

Customizable workflows based on snakemake and python for the analysis of NGS data
http://snakepipes.readthedocs.io
MIT License
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ChIP-seq CSAW group #947

Closed sunta3iouxos closed 5 months ago

sunta3iouxos commented 9 months ago

Hi again, I noticed that in the RNA-seq pipeline there is an implimentation of group field in the samplesheet, so that the pipeline can do multiple pairwise comparisons based on the group (ex group1, group2 etc) Is it possible to implement this for the ChIP-seq pipeline? Thank you!

katsikora commented 5 months ago

This is now implemented in snakePipes 2.8.0 and 2.8.1.