maxplanck-ie / snakepipes

Customizable workflows based on snakemake and python for the analysis of NGS data
http://snakepipes.readthedocs.io
MIT License
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fix `--predictChIPDict` for cutNX #973

Open katsikora opened 5 months ago

katsikora commented 5 months ago

--predictChIPDict ran on projects without control samples gives a dictionary, in which controls as listed as quoted empty strings. Parsing this in ChIP-seq results in control samples being recognized as empty strings and missing input error for some of the rules that expect control samples.

Related to #967