maxwnewcomer
commented
3 years ago Here's the code for extracting time from run.sh (in NWT_SUBMIT/NWTOPT_FILES/objective.py, runModel()). timelim is what is used to timeout the modflow process. timelim needs to be in seconds given the function that is using it (subprocess.run). As you can see in the the try: except: the last line of run.sh is converted to seconds by multiplying by 60 and is set. It is then divided by 60 inline so that we can display the time out in minutes to the user (I've been assuming that setting timeout in minutes is much more convenient than setting in seconds). If the float() conversion fails, then there must be an errored input in the last line of run.sh, or it must be empty, resulting in timelim being set to none and the program informing the user of this. Let me know if you still think this is flawed, but after some tests of my own, it seems to be working (I put in a timeout of 12.5 minutes for a run and the upper bound of time elapsed for all the runs was 750 seconds, which checks out)
with open(os.path.join(cwd, 'run.sh')) as f:
for line in f:
if use_next:
run_command = line
use_next = False
elif line.startswith('# Run Command:'):
use_next = True
last_line = line
try:
timelim = float(last_line) * 60
print(f'[INFO] Timeout for model run is set to {timelim / 60} minutes')
except Exception as e:
timelim = None
use_timer = False
print('[INFO] No timeout set for model run')
print(f'[INFO] Using run command: {run_command.strip()}')
print(f'[INFO] Starting run out of {cwd}')
mnfienen
hwreeves-USGS
Looks like the example
run.shscript says to enter timeout value in minutes but the code is converting to seconds.....just need to choose :)