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mazeller / FLUture

Source Code for FLUture website
GNU General Public License v3.0
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Use clade classification logic to make api #39

Open anugrah-saxena opened 5 years ago

anugrah-saxena commented 5 years ago
  1. Use the clade classification logic to expose an api for users where they can submit their sequence and get the predicted clade along with the accuracy, precision score, etc. for the prediction made.
  2. Add Blosum62 for weighted matc mismatch score and gap penalty.
anugrah-saxena commented 5 years ago

Initial progress has been made using similar logic as Identity Tool and internal classifier to get the alignment using php, ajax and JS. Further work needs to be done and roadblocks need to be identified.

mazeller commented 5 years ago

Please be prepared to present on it tomorrow. Prepare slides as necessary.

anugrah-saxena commented 5 years ago

Ok. i will prepare for current work and future work plans.

anugrah-saxena commented 5 years ago

Blosum62 added, but percentage likelihood is extremely low. Root cause identification in process.