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mazzalab / pyntacle

A high performance python package for network analysis based on non canonical metrics
http://pyntacle.css-mendel.it
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[cmd] Error in intersection #53

Closed Bioswinger closed 3 years ago

Bioswinger commented 3 years ago

command line guide

command used:pyntacle set intersection -1 AdvSeek.adjm -2 APID_CAEEL_Level2_maincomponent.adjm -f adjm -u adjm --report-format xlsx

output :

Running Pyntacle set
******************************************  FILE IMPORT  *******************************************
Reading first input file
Adjacency matrix from AdvSeek.adjm imported
Reading second input file
Adjacency matrix from APID_CAEEL_Level2_maincomponent.adjm imported
****************************************************************************************************
*******************************************  RUN START  ********************************************
Performing intersection between input graph AdvSeek.adjm and APID_CAEEL_Level2_maincomponent.adjm
exceptions.unsupported_graph_error.UnsupportedGraphError: Graph must contain at least two nodes
mazzalab commented 3 years ago

Empty intersection was not properly handled in the version. 1.3. This will be fixed in ver. 1.3.1