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mbari-org / vars-annotation

Video Annotation Application for MBARI's Media Management (M3) software stack
https://docs.mbari.org/vars-annotation/
Apache License 2.0
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VARS X merge; update instructions #88

Closed lindakuhnz closed 5 years ago

lindakuhnz commented 6 years ago

Current Arguments: rovName = The name of the ROV (e.g. "Doc Ricketts") diveNumber = The dive number for the dive to be merged

Script requites the use of 'Doc Ricketts" vs "Doc Ricketts". Can you update the argument text? Thanks.

lonnylundsten commented 5 years ago

The steps for doing this are located here. Brian will verify that the code has not changed today. https://mww.mbari.org/itd/video/vars_scripts/docker/varsx_dive_merge.html

lonnylundsten commented 5 years ago

OK to close

hohonuuli commented 5 years ago

Updated instructions

Instructions

This script will allow you to manually merge dive data with observations using a shell within a Docker container.

  1. Install Docker Community Edition (CE, free)
  2. Start Docker
  3. Open a terminal and run: docker pull portal.shore.mbari.org:5000/mbari/m3-merge-rov
  4. Start the merge console by typing in terminal: docker run -it portal.shore.mbari.org:5000/mbari/m3-merge-rov /bin/bash
  5. In the merge console, change directories: cd /opt/m3-merge-rov/bin
  6. In the merge console the expedition data: ./merge_rov <'ROV_Name'> <'Dive Number'>

Examples:

./merge_rov 'Doc Ricketts' 953
./merge_rov Ventana 4110

To display help, run ./merge_rov -h:

Usage: merge_rov [-hV] [-d=<toleranceSeconds>] [-t=<timeoutSeconds>] ROVNAME
                 DIVENUMBER
Merge a single MBARI ROV dive with ancillary data from the EXPD database. This
includes merge with position, ROV pose, and CTD data.
      ROVNAME      The ROV Name. If it has a space wrap it in quotes.
                   ('Doc Ricketts', Ventana, Tiburon)
      DIVENUMBER   The dive number. e.g. 1234 or 654
  -d, --tolerance=<toleranceSeconds>
                   Tolerance for finding nearest expd data log record (default: 7.0)
  -h, --help       Show this help message and exit.
  -t, --timeout=<timeoutSeconds>
                   Timeout for web service calls in seconds. (default: 600)
  -V, --version    Print version information and exit.