error: Invalid value "P2B_R1.fastq.gz" for '--input <INPUT>...': "P2B_R1.fastq.gz" does not exist
I installed the latest version of rasusa through Docker - following the commands listed on the GitHub page. I used a path at first to find the input files but it gave me that error message so I moved the files to my home directory where I run docker images but that didn't work either. If someone could help me figure out how to fix this error that would be great!
I got it to work! I went back and installed the tool through Git and was able to set the two files to 5x coverage! (I also had to unzip the files, but it worked!)
I'm trying to use rasusa to downsample some Illumina short reads to a smaller coverage using this command here:
However, I keep getting this error message:
I installed the latest version of rasusa through Docker - following the commands listed on the GitHub page. I used a path at first to find the input files but it gave me that error message so I moved the files to my home directory where I run docker images but that didn't work either. If someone could help me figure out how to fix this error that would be great!