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mckellardw / scMuscle

The Cornell Single-Cell Muscle Project (scMuscle) aims to collect, analyze and provide to the research community skeletal muscle transcriptomic data
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Impossible to load the data on the web app #10

Closed CroixJeremy2 closed 1 year ago

CroixJeremy2 commented 1 year ago

Hello, It seems that I can't navigate through your data on the web app. I get this error message on every tab:

Screenshot 2023-06-20 at 10 52 44

When I go to http://scmuscle.bme.cornell.edu/ , my web browser is loading the data as I have to wait (loading icon):

Screenshot 2023-06-20 at 10 57 00

At some point, it stops, and it says "Check your logs", but I don't know where to look at them. Do you know how to solve the problem? I am on an iMac (Retina 4K, 21.5-inch, 2017), CPU: 3,4 GHz Quad-Core Intel Core i5. Memory: 16 GB 2400 MHz DDR4. At some point I tried to download the whole dataset and to read it in R directly, but my computer does not have enough memory to read scMuscle_mm10_slim_v1-1.RData apparently... So I would like, at least, to use the web app. Thanks in advance for your response, and thanks again for having generated such a huge interesting integrated scRNA seq object ! Best regards,

mckellardw commented 1 year ago

Thanks for letting us know! This has been a recurring problem, and we are actively working on transitioning to a better platform for hosting the dataset (stay tuned!).

In the meantime, I rebooted the server so you should be able to use it as before.