mclements
commented
5 years ago I need to push/copy the core branch to master, particularly as the code branch is being used with the development of the prostata model. You can use:
devtools::install_github("mclements/microsimulation", ref="core")
Note that this may create a static library which includes all of the symbols from Rcpp.
I hope that this is useful.
Sincerely, Mark.
On 21 Feb 2019 21:50, Enzo notifications@github.com wrote:
I'm on osx & R 3.5.2
Is there any plan to update the package (& fix the error)?
Thanks
devtools::install_github("mclements/microsimulation")
Downloading GitHub repo mclements/microsimulation@master
✔ checking for file ‘/private/var/folders/9v/251f7k_x6hn8t9wsz8v21rgh0000gn/T/RtmpiYMGPo/remotes1545b5e75bb/mclements-microsimulation-63abdcc/DESCRIPTION’ ...
─ preparing ‘microsimulation’:
✔ checking DESCRIPTION meta-information
─ cleaning src
─ checking for LF line-endings in source and make files and shell scripts
─ checking for empty or unneeded directories
─ looking to see if a ‘data/datalist’ file should be added
─ building ‘microsimulation_1.1.tar.gz’
Installing package into ‘/usr/local/lib/R/3.5/site-library’
(as ‘lib’ is unspecified)
- installing source package ‘microsimulation’ ...
** libs
clang++ -I"/usr/local/Cellar/r/3.5.2_2/lib/R/include" -DNDEBUG -I"/usr/local/lib/R/3.5/site-library/Rcpp/include" -I"/usr/local/lib/R/3.5/site-library/BH/include" -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -I/usr/local/include -I. -DVERSION=\"1.7.6\" -fPIC -g -O2 -c microsimulation.cc -o microsimulation.o
In file included from microsimulation.cc:6:
In file included from ./microsimulation.h:40:
In file included from /usr/local/lib/R/3.5/site-library/BH/include/boost/unordered_map.hpp:17:
In file included from /usr/local/lib/R/3.5/site-library/BH/include/boost/unordered/unordered_map.hpp:19:
In file included from /usr/local/lib/R/3.5/site-library/BH/include/boost/move/move.hpp:30:
In file included from /usr/local/lib/R/3.5/site-library/BH/include/boost/move/iterator.hpp:27:
/usr/local/lib/R/3.5/site-library/BH/include/boost/move/detail/iterator_traits.hpp:29:1: warning: inline namespaces are a C++11 feature [-Wc++11-inline-namespace]
BOOST_MOVE_STD_NS_BEG
^
/usr/local/lib/R/3.5/site-library/BH/include/boost/move/detail/std_ns_begin.hpp:18:34: note: expanded from macro 'BOOST_MOVE_STD_NS_BEG'
define BOOST_MOVE_STD_NS_BEG _LIBCPP_BEGIN_NAMESPACE_STD
^/Library/Developer/CommandLineTools/usr/include/c++/v1/__config:445:52: note: expanded from macro '_LIBCPP_BEGIN_NAMESPACE_STD'
define _LIBCPP_BEGIN_NAMESPACE_STD namespace std {inline namespace _LIBCPP_NAMESPACE {
^In file included from microsimulation.cc:6:
./microsimulation.h:56:49: error: expected expression
boost::hash_combine(seed, tuple.get<Index>());
^./microsimulation.h:64:43: error: expected expression
boost::hash_combine(seed, tuple.get<0>());
^./microsimulation.h:588:19: error: no type named 'iterator' in 'CostReport<State, Time, Cost>'
typename This::iterator it;
1 warning and 3 errors generated.
make: *** [microsimulation.o] Error 1
ERROR: compilation failed for package ‘microsimulation’
* removing ‘/usr/local/lib/R/3.5/site-library/microsimulation’
Error in i.p(...) :
(converted from warning) installation of package ‘/var/folders/9v/251f7k_x6hn8t9wsz8v21rgh0000gn/T//RtmpiYMGPo/file1545b186667a2/microsimulation_1.1.tar.gz’ had non-zero exit status
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andreasakarlsson
smartinsightsfromdata
I'm on osx & R 3.5.2
Is there any plan to update the package (& fix the error)?
Thanks