Error message during installation

mcveanlab / mccortex

De novo genome assembly and multisample variant calling

https://github.com/mcveanlab/mccortex/wiki

MIT License

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Error message during installation #53

Closed abeu9727 closed 7 years ago

abeu9727 commented 7 years ago

We are getting this error message during installation. Any ideas on how to resolve this? Thanks.

make all cd libs; make make[1]: Entering directory '/home/microstaff/Software/mccortex/libs' make[1]: No rule to make target 'xxHash/Makefile', needed by 'xxHash'. Stop. make[1]: Leaving directory '/home/microstaff/Software/mccortex/libs' Makefile:324: recipe for target 'libs/string_buffer/string_buffer.h' failed make: [libs/string_buffer/string_buffer.h] Error 2

noporpoise commented 7 years ago

Did you clone with:

git clone --recursive https://github.com/mcveanlab/mccortex

If you missed the --recursive, you need to run: git submodule update --init --recursive, then try make all again.

abeu9727 commented 7 years ago

Thank you for your help. This has resolved the problem.