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mcveanlab / mccortex

De novo genome assembly and multisample variant calling
https://github.com/mcveanlab/mccortex/wiki
MIT License
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Sorted flag in .ctx header #85

Closed izaak-coleman closed 5 years ago

izaak-coleman commented 5 years ago

Is there a byte flag in the .ctx header to specify whether the .ctx has been sorted, if so, which (nth) byte?

Many thanks! Izaak

winni2k commented 5 years ago

There's a draft spec of the cortex format here. It does not look like the header contains the bit you are looking for.

izaak-coleman commented 5 years ago

Thanks @winni2k