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md5sam / Falcon2Fastg

Falcon2Fastg is a tool for converting a FALCON assembly to FASTG format to visualize with Bandage
MIT License
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Visualize contigs instead of reads #12

Closed md5sam closed 8 years ago

md5sam commented 8 years ago

For larger assemblies, it might be useful to visualize contigs instead of reads on Bandage. User should be able to specify --contig option with Falcon2Fastg, which then generates a Fastg file where nodes in the header represent contigs. This may require the files 'ctg_paths' and 'p_ctg.fa'