Install missing dependencies and test cwl pipeline on nanexpression

[LucyHut]

Make sure the cwl pipeline can run on nanexpression install missing dependencies as needed.

[LucyHut]

Installed the following the following dependencies:

sudo yum install cwltool sudo pip install cwltool sudo pip install --upgrade scipy sudo pip install numpy==1.8 sudo pip install pandas==0.20.2 sudo pip3 install --upgrade scipy sudo pip3 install pandas matplotlib matplotlib_venn pickle patsy statsmodels jinja2 GEOParse HTSeq html5lib urllib3

sudo pip install biopython (https://biopython.org/wiki/Download) sudo pip uninstall backports.functools_lru_cache sudo pip install backports.functools_lru_cache sudo pip install matplotlib sudo yum install zip sudo yum install unzip