Difference between number of HMM and Liste of hmm file

mdmparis / defense-finder

Systematic search of all known anti-phage systems.

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Difference between number of HMM and Liste of hmm file #22

Closed jpjarnoux closed 6 months ago

jpjarnoux commented 1 year ago

Hi As request in issue #11, I'm wondering why there are 1018 HMM in profile repository but only 848 are listed in Liste_hmm_system.md. It's really annoying, because I can't link automatically HMM with their GA_cut. Could you please update the file ? Or explain why this difference. Moreover, It could be good to have a unique HMM accession ID for all HMM, for same reason than before this make automatization more difficult. Thanks.

github-actions[bot] commented 6 months ago

This issue has been inactive for 60 days and is now marked as stale. It will be closed in 7 days without further activity.