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mdshw5 / pyfaidx

Efficient pythonic random access to fasta subsequences
https://pypi.python.org/pypi/pyfaidx
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Add indexname kwarg to Faidx and Fasta #192

Closed mdshw5 closed 2 years ago

mdshw5 commented 2 years ago

This adds support for specifying an .fai index file at an arbitrary filesystem location or fsspec. First suggested in #190.

mdshw5 commented 2 years ago

There are lots of edge cases I hadn't considered here, and this shouldn't be considered a good implementation.