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med-air / HarmoFL

[AAAI'22] HarmoFL: Harmonizing Local and Global Drifts in Federated Learning on Heterogeneous Medical Images
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what kind of ID is indicated by the index.npy files? #5

Open wfarz001 opened 1 year ago

wfarz001 commented 1 year ago

Thank you for sharing your work. I was curious to understand the id's in index.py file under "data" folder, what kind of id's are they? and in the code is 2d slices is utilized rather then 3D nifti array images?

SongSansi1998 commented 1 year ago

I also have the same issue, did you solve this problem now?

MeiruiJiang commented 1 year ago

Many thanks for your interest in our work. For the prostate segmentation task, we use 2D slices because the prostate data have large slice thickness with limited 3D information. The id in the index.py denotes the order of 2D slices. Please see dataset.py line87 for more details.

cui-yc commented 4 months ago

Thank you for sharing your work. I was curious to understand the id's in index.py file under "data" folder, what kind of id's are they? and in the code is 2d slices is utilized rather then 3D nifti array images?

Is there any index.py file in the data folder? Now all I see are the folders camelyon17 and prostate, and if I want to use prostate, is it right to use prostate? Or do you need to make changes?