Open snayfach opened 3 years ago
Running into several other issues now. For example on ~ line 197:
absolute_loc_start = record.annotations["structured_comment"]["antiSMASH-Data"]["Orig. start"]
However, the "Orig. start" key is not in record.annotations["structured_comment"]["antiSMASH-Data"] for my genbank files. It might be helpful is there were a small test dataset that could be quickly run
BiG-MAP.family takes output produced by antiSMASH/gutSMASH as input. Did you run one of these tools on your genbank files before using them as input for BiG-MAP?
Hello - I've just downloaded the tool and am getting started. Tried a test run but ran into the error below. Adding
-k 16 -s 5000
did not solve the issue:python BiG-MAP/src/BiG-MAP.family.py -p 8 -D bgcs -O test