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medema-group / bigslice

A highly scalable, user-interactive tool for the large scale analysis of Biosynthetic Gene Clusters data
GNU Affero General Public License v3.0
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antismash version7 output not recognized by bigslice #77

Closed HongjaePark86 closed 7 months ago

HongjaePark86 commented 10 months ago

Hi,

I aim to use bigslice with gbk files produced by AntiSMASH version 7. However, it appears that there are subtle differences between the gbk files generated by AntiSMASH versions 5 and 7, resulting in the following error messages. Could you provide guidance on resolving this compatibility issue?

RIMVE-SM-01nov21/PELAGICS-MAG-m2-bin116914-RIMVE-SM-01nov21.region001.gbk is not a recognized antiSMASH clustergbk RIMVE-SM-01nov21/PELAGICS-MAG-m2-bin116924-RIMVE-SM-01nov21.region003.gbk is not a recognized antiSMASH clustergbk RIMVE-SM-01nov21/PELAGICS-MAG-m2-bin116921-RIMVE-SM-01nov21.region001.gbk is not a recognized antiSMASH clustergbk RIMVE-SM-01nov21/PELAGICS-MAG-m2-bin116930-RIMVE-SM-01nov21.region002.gbk is not a recognized antiSMASH clustergbk

BioGavin commented 10 months ago

I have the same problems.

satriaphd commented 7 months ago

BiG-SLiCE 2 is now out! comes with support for antiSMASH v7