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medizininformatik-initiative / Projectathon7-VHF-DataSHIELD

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Error loading productive data #3

Closed fnwirth closed 1 year ago

fnwirth commented 1 year ago

When using the current version of ds-data-import.R to load productive/real-word data I receive the following error message

Error: The data file "Cohort.csv " doesn't have 15 columns. This file doesn't have the structure we expected.
 Please make sure this file has the appropriate structure first and then try again.
Execution halted

With the second last version of ds-data-import.R and ds-data-import-functions.R it worked. Is this an issue with the script or is it necessary to re-run the data loading process in the DIZ?

tkirsten commented 1 year ago

The data structure has been changed. The birthday is replaced by person's age. Physically, the column has been dropped while the age column is append to the table (last column). Therefore, all column indexes used by the script need to be updated.

fnwirth commented 1 year ago

using new version of script fixes problem