medvedevgroup / SibeliaZ

A fast whole-genome aligner based on de Bruijn graphs
http://medvedevgroup.com/
Other
141 stars 19 forks source link

PackagesNotFoundError: The following packages are not available from current channels: - sibeliaz #46

Open ne1al opened 1 year ago

ne1al commented 1 year ago

Hello, I am trying to install SibeliaZ on a conda environment using the following codes: conda install -c bioconda sibeliaz and conda install sibeliaz but I keep getting the error:

`Collecting package metadata (current_repodata.json): done Solving environment: failed with initial frozen solve. Retrying with flexible solve. Collecting package metadata (repodata.json): done Solving environment: failed with initial frozen solve. Retrying with flexible solve.

PackagesNotFoundError: The following packages are not available from current channels:

Current channels:

To search for alternate channels that may provide the conda package you're looking for, navigate to

https://anaconda.org

and use the search bar at the top of the page.` Any advice?

coryVkeith commented 1 year ago

I have recently run into this issue as well. I have used sibeliaz in the past with no problems, but am having issues with installation on a new environment. I am also having issues installing the tool on a local machine. Are you still maintaining the code?

iminkin commented 1 year ago

Hi, @coryVkeith I do try my best to maintain the code. I will try to reproduce the error and get back to you.

aforestsomewhere commented 1 year ago

I tried to install sibeliaz afresh today and it worked perfectly with "conda install -c bioconda sibeliaz" so it seems to have been updated. Looking forward to trying it out now, thanks!

ne1al commented 1 year ago

@aforestsomewhere thank you! I will give it a try